Scyliorhinus canicula (smaller spotted catshark): 119963635
Help
Entry
119963635 CDS
T11175
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03272
Virion - Hepatitis viruses
scau04382
Cornified envelope formation
scau04514
Cell adhesion molecule (CAM) interaction
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119963635 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119963635 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119963635 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119963635 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119963635 (cldn5a)
04147 Exosome [BR:
scau04147
]
119963635 (cldn5a)
Cilium and associated proteins [BR:
scau03037
]
Other cilia and associated proteins
Stereociliary proteins
119963635 (cldn5a)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119963635 (cldn5a)
Exosomal proteins of colorectal cancer cells
119963635 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
zf-LITAF-like
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
119963635
NCBI-ProteinID:
XP_038648894
LinkDB
All DBs
Position
1:70268909..70270821
Genome browser
AA seq
216 aa
AA seq
DB search
MPSAGLEIVGLGLCVLGWLGVMLACGLPMWKVTAFIESNIVVAQTVWEGLWMNCVVQSTG
QMQCKVYNSLLSLGRDQQAARALTVIASILGLIGLLVTILGAQCTNCTEGVTTKVRIVIS
GGAIFIIAGLLALIPVCWMANTIVRDFYDPIVPVSRKREMGAALYIGWTASALLFIGGSL
LCCSCPPKQDQSSFAVKYTAPRRASANGDYDKRNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcaggtttggagattgtgggcctggggctgtgtgtcctgggctggctgggg
gtcatgctggcttgcgggctgcccatgtggaaagtgacggctttcatcgagagcaacatc
gtggtggcgcagacggtgtgggaagggttgtggatgaactgcgtggtgcagagcaccggg
cagatgcaatgcaaagtctacaactcgctgctgtccctggggcgggatcagcaagccgcc
cgagcgctgactgtcatcgcctccatcctgggactcattgggctcctggtcaccatcctg
ggcgctcaatgcaccaactgtactgagggggtgaccaccaaagtccggatcgtcatcagc
ggaggagccatcttcatcatagccggcttactggccctcattccggtctgctggatggcc
aacaccatcgtgcgcgacttctacgacccgattgtgcccgtctccaggaagagggagatg
ggggcggcgctctacattggctggacggccagtgcgctcctcttcatcgggggctccctg
ctctgctgctcctgcccgcccaagcaagaccagtcatccttcgccgtcaagtacactgcc
ccgaggagagcatcggctaacggggattacgacaagaggaattacgtgtga
DBGET
integrated database retrieval system
