Scyliorhinus canicula (smaller spotted catshark): 119963672
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Entry
119963672 CDS
T11175
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119963672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119963672
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119963672
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
HECT type E3
119963672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119963672
NCBI-ProteinID:
XP_038648917
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All DBs
Position
3:complement(263084430..263155442)
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AA seq
978 aa
AA seq
DB search
MLCWGELGSGIQHKPSSQTEGVLTGQRIQHVCSRDGVTVFVLGNGKVYIKIRGRKRKTEP
GPFPHFKQQRIHFAACGTSHILFLSQAGTVYQSEVKLKHTAAATKEFSIMKPQVLKSLSE
KNIIQVACGNNHSLALSKDGQLFVWGQNTCGQLGIDTKGASQPVPQCVTSLTGMPVAQIT
AGGGHSFALSLSGAVFGWGRNDRGQLGLKDTEDRHQPNHVKLLECKKTIHISCGEEHTAV
LTKDGLVLTFGAGSYGQLGHNSTKDEIKPRLVGYLFGKRVSQIACGSYHTLAFVASSGEI
YSFGRGENGQLGNGESGDQLVPLPVSIMDTPDKNGTENGLTTKPAVRRILAGGSQSFVQI
CDEAGLESSVDPSALYTLKRIMKVDRVLEKELDRNTMRSIVQAFSSSQSLSASFLDVSKD
GHFNTNGEMSGLDMSAVYRAFLKLDNKPSVLEKVKNAVQDKLIPSLPRSPACVETMRVYI
ILPELIAVLTDTATLTDSLNKAILSLKESYLKILECWWSTMPYYFFMRLVDMYQKKSKQL
LKLTVEGTLKDESELHDSLTILQTLYKVNSSRSKKIPERKFRIPVMEIKYVVKLIAYPCI
FDAEAKLEALNWWSAQAMQWTAQSLMASNQPICLQVSRQMILQDALEGLRSTRLYLCCPL
LKPKHRQNLYPQKLRILYPQGRDLHSNGRIFQRSEDSELLWFPSWELERDDVFNLVGILC
GLAVSNGFICNFHFPLALYKKLLHVQPTLEDLKELSPVEGNSLQEVLDYEYDDTEDAFCL
DFTVPRQTADGDTIYQDLIPNGSEIPVQKHNRKQYVDAYVDYKLNTSVNNQFEAFARGFS
DWAVAVVKIFQPEELRDLIHGNADYEWELLEQNADYDGYIRTDKAVRNFWEVFRNLDVEK
KKRFLAFLSGSDRLPVGGIQNLKIAIINTRSSEPDSSYPRAYTCSRSLDLPNYSNIKILR
EKLLHAIESSGEFNAQEL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgttggggggagctgggctcaggaatccagcacaaacccagctcacagacagag
ggagttctcacagggcagagaattcaacatgtttgcagccgggacggagtcactgtgttt
gtgttgggaaacgggaaggtttatatcaaaatccgtggacggaagaggaaaacagaacct
gggccgtttcctcacttcaagcagcagagaatccactttgcagcttgtgggacctcccac
attctgttcctttcccaagcaggaactgtttatcagagtgaagttaaattgaagcacact
gcagctgccacaaaagaattctccatcatgaaaccacaggtacttaagagtttgagcgaa
aaaaacataattcaagtggcctgtggaaacaatcactcattggcattgtccaaagatggc
caactctttgtctggggacagaacacttgtggccagcttggtatcgatacaaaaggggcc
tcccagcccgtccctcagtgtgtgacctctctcactgggatgcctgtggctcagatcact
gcaggaggaggacacagcttcgccctgtctctctcaggggcagtgttcggttggggaaga
aacgatcgtgggcagctggggctcaaggacacggaagatcgacatcagcccaaccacgtg
aagctgctggagtgtaagaagaccatccacatctcttgtggggaagaacacactgctgtt
ctgacaaaggatggactggttttaacctttggagctggaagttacgggcaacttggacac
aactccacaaaggatgagatcaaacctcgtctcgtcggctacctgtttggaaagagagtt
tctcagatagcatgtgggagctatcacacacttgccttcgttgcatcgtctggtgagatt
tattcttttggtcgtggagagaatgggcagctggggaacggagagagcggtgatcagtta
gtgcctcttcctgtcagcatcatggacacacctgacaaaaatggaacggaaaatggcctg
acaaccaaaccagctgtgagaagaatccttgcaggaggaagccaaagctttgtacagatc
tgtgatgaagcgggtttggagtcctctgttgacccatctgcactgtatactttgaagaga
atcatgaaagtggacagggtactcgagaaggagttggacagaaacacgatgaggtcaatc
gttcaggcattttcttcttcccaaagtttgagtgcaagtttcctggatgtcagcaaggat
ggccatttcaacacaaacggagagatgtccggcctggacatgtctgcagtatatcgggca
ttcctgaagttggataataaaccctcagtgttggaaaaggtgaagaacgcagtgcaagat
aaactgatcccgtcattacctcgatctccagcttgtgtggaaacaatgcgggtttacatt
attctcccagaactcatcgctgtgctgacagacaccgcaacgctgacagactctttaaac
aaagccattctctcgctcaaagaaagttatctcaaaattcttgaatgctggtggagtaca
atgccttattatttcttcatgcgccttgtggatatgtatcaaaaaaaatcaaagcaactt
cttaaactcactgtggagggcaccttgaaggacgagtccgaactacatgattcattaaca
attttacaaacactttataaggtaaactcgagcagaagtaagaagatcccagagagaaag
tttcgcattcctgtgatggaaattaaatatgttgtgaaattaattgcttatccttgcatc
tttgacgcggaagcaaagctggaagcattgaactggtggtcagcacaggcaatgcaatgg
acagcacagagtctgatggcttcaaatcaaccgatttgtctgcaggtgtcaagacaaatg
attcttcaggatgctctggaaggcttaagatccaccagattatatctgtgttgtcctcta
cttaagccaaaacaccggcaaaatctatacccacagaagttgagaattctttaccctcag
ggtcgggatctacacagcaacggacggatattccagcgctccgaggattctgagttgctc
tggttccccagctgggagctagaaagggatgatgtatttaatctggtgggaattctctgc
ggacttgctgtgtccaatggttttatttgcaattttcacttcccgctggctttgtacaaa
aagctgctccacgtgcagccaacactggaagacctgaaggaactctcaccagtagaagga
aattcactccaggaagtccttgactacgagtacgatgacacagaagatgcgttttgtctg
gattttaccgtacccaggcaaacagctgatggggacactatttaccaggatctcattcca
aatggtagcgaaatcccagttcaaaagcataataggaaacagtacgttgatgcttatgtg
gattataaacttaacacttccgtgaataatcaatttgaagcctttgcacgaggtttcagc
gattgggcagtggcagttgtgaaaatattccaacctgaagaactgagagaccttatccat
ggaaacgccgattatgagtgggagctgctggaacagaatgcagattatgatggctacata
cgaactgacaaagcagtcaggaatttttgggaagtcttcagaaacctagatgtggagaag
aaaaagcgttttctggcctttctgtcgggaagcgacaggctcccagtgggaggcattcag
aatctcaagattgccattataaacaccaggagcagtgaaccggattcctcatatcctcgc
gcctacacctgttccaggagcctggaccttcccaattacagcaacatcaaaatactgaga
gagaagttgcttcatgcgattgaatccagcggagagttcaatgcacaagaactatga
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