Scyliorhinus canicula (smaller spotted catshark): 119963901
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Entry
119963901 CDS
T11175
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103 isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119963901 (rnf103)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119963901 (rnf103)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119963901 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
Thioredoxin_6
zf-RING_5
zf-C3HC4_3
DDE_Tnp_1
DHX37_C
Motif
Other DBs
NCBI-GeneID:
119963901
NCBI-ProteinID:
XP_038649219
LinkDB
All DBs
Position
3:35034158..35110067
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AA seq
674 aa
AA seq
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MWLKLFFLLLYFLVLFVLARFFEAIVWCETGVFATQLVDPVALSFKKLRTILECRGICYA
GLPEKKDVRELVQKSGDLMEGELYSALREEEASESTSSTNFSGEMHFYEQVEDTKDGIWL
VQVVAKDKEPLLCKNQWHKMVKKVSQFGIRTGAFNCSNDPRYCSKRGWMKSTLIMSIPQT
NTSKGKVMLKEYSGRRIEVEHIFKWINAHVASRIKTIRSTDQLMEEWNKSDRYLVKMYLF
ANLDQPPAFYSVLSVKFTGRVEFIFVDVQKWNNDIRMKEIGVHQFPAYIVKTPEGIYKYG
NTTGEFISHHAMDVFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTL
GTYNSLLIMSWLPIIGFLQLPYLESFYEYSLKFLRYANTTTLASWVRADWTFYSSHPALF
LSTYLGHGLLIDYFEKKRRRNNNDDEVNVNNLEWLSSLWDWYTSYLFHPIASFQHYPHTL
DWEEDPDLLLERLAFPDLWLHPLIPTDYIKNLPTWRFKCVAGHSEDEISESCHETDSDSE
SENHDVMCNKSGVSDNEESSARLLPAEGKVQTNEESSAGERSSGSISQSTPRLHGNTSVT
EDDEPDWSTWPNNMLHCSECVVCLENFKNGCLIMGLPCGHVFHQQCIVVWLAGGRHCCPV
CRWVSYKKKHQFVR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaagctgttcttcctgctgctctacttccttgtcctgttcgtgctggctcgc
ttcttcgaggccatcgtctggtgcgagaccggcgtgttcgccacgcagctggtggacccc
gtggccctgagcttcaagaagctccgcaccatcctggagtgcaggggcatctgctacgcc
ggcctacccgagaagaaagatgtccgggagctggtgcagaaatcaggtgatttgatggag
ggtgaactttattctgcacttcgggaagaagaagcatcagaatctacctccagcaccaac
tttagtggtgagatgcatttctacgagcaagtggaagacactaaagatgggatctggctg
gtccaagttgtagctaaggataaagaacctttattgtgcaagaatcaatggcacaagatg
gtgaagaaagtgtcccagtttggtatacgtacaggagctttcaattgttccaatgacccc
aggtactgtagcaaaagagggtggatgaaatccacactcataatgtccattccgcagact
aacacttcaaaaggaaaagtgatgctaaaggagtacagtggccgcaggattgaagtggag
catatttttaaatggataaatgcacatgtggcatctcggatcaaaacgatccgaagcact
gatcagttaatggaagaatggaacaaaagtgaccggtatcttgtaaagatgtacttgttt
gcaaacctggaccaaccgcctgcattctactctgttctcagtgtcaagtttacaggtcgt
gtggaattcatatttgttgatgtccagaaatggaacaatgacattcgcatgaaggagatt
ggtgtacatcagttcccagcatatatagtgaaaactcctgaaggaatctataaatacggg
aacactacaggggagtttatatcacatcatgcaatggatgtattccttcgatcattgcag
cctgaagtaaatgatctatttgtcttaagtttagttttggttaacttaatggcatggatg
gacttgttcataacacaaggtgctacaataaaacgatttgtggttcttataagcacactt
ggaacttataactccttattaataatgtcctggctacctataattggatttcttcagtta
ccatatttggaaagtttttatgaatatagtttaaaatttttgaggtatgccaacacaacc
actttggcttcttgggtacgagctgactggactttctactcatcccatccggcactgttt
ctcagcacatacctgggccatggtttgctaatagattactttgagaaaaaaaggagacgt
aataataatgatgatgaagtaaatgttaataaccttgagtggctgtcaagtctgtgggat
tggtatacaagctatttgttccatccaattgcttcatttcagcattaccctcacactttg
gattgggaggaagatcctgatttgttgctggagagacttgcattcccagacctatggctg
cacccattgataccaacagattacataaagaacctcccaacatggcgatttaaatgtgtt
gcagggcattctgaagatgaaataagtgaaagttgccatgagactgatagtgattctgaa
agtgaaaaccacgacgtaatgtgtaataaatcaggggtaagtgataatgaagagtcaagt
gcacgcctgttgcccgctgaaggaaaggtacaaactaatgaagaaagcagtgctggtgag
agaagttctggcagtatttctcaaagcacaccaagactacatggaaacacaagtgtaact
gaagatgatgagccagattggtcaacttggcccaataacatgctgcattgctcagaatgc
gtggtgtgcctggaaaatttcaaaaatggctgcttaataatggggctaccctgtggtcat
gtgttccatcagcagtgcattgtggtctggttggcaggagggcgacactgctgccccgtg
tgcagatgggtttcgtataaaaagaagcatcaatttgttagataa
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