Scyliorhinus canicula (smaller spotted catshark): 119963934
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Entry
119963934 CDS
T11175
Symbol
letm1
Name
(RefSeq) mitochondrial proton/calcium exchanger protein isoform X1
KO
K17800
LETM1 and EF-hand domain-containing protein 1, mitochondrial
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
scau03029
]
119963934 (letm1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119963934 (letm1)
Mitochondrial biogenesis [BR:
scau03029
]
Mitochondrial protein import machinery
Inner mambrane
Other inner membrane factors
119963934 (letm1)
Transporters [BR:
scau02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
119963934 (letm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LETM1_RBD
EF-hand_7
EF-hand_1
EF-hand_6
SAP
Motif
Other DBs
NCBI-GeneID:
119963934
NCBI-ProteinID:
XP_038649295
LinkDB
All DBs
Position
3:complement(42547559..42666727)
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AA seq
778 aa
AA seq
DB search
MTFMLFTSCRPSLWKTPNVVCRGVRKGGVGEIACLKCIALRLTSHRNVWIRNCSTISTSS
SPLHVRDPCNNWTKGPKRLCCGVVGAPLPCPSTNMSFIGTRYVSVRWWHSTHHRYDDSKV
EKSLKSLKDKNKRLEEGGPVYSPIEPEVRRSLGQKIVDEVKHYYHGFRLLWIDTKIAGRM
LWRILNGYDLSRREHRQFLRTCADLFRLVPFLVFIIVPFMEFLLPVVVKLFPNMLPSTFE
TKSKKEERLKKELRVKLEMAKFLQDTIEEIALRNKAAKGDVTKDFSTFFQKIRDSGERPS
NEEIMRFSKLFEDELTLDNLTRPQLVALCKLLELQSIGTNNFLRFQLIMKLRSIRADDQL
IAEEGVTTLNVNELQAACRTRGMRALGVTEARLQEQLKQWLELHLNQQIPTSLLLLSRAM
FLPDTLSPADQLTTTLQTLPDSVAKEAQVKVAEVECDKVDNKAKLEATLQEEAAIKRENQ
ERELERMAEAAEKAKESLQVEARKEIESAVNLEAAAVNVKQSQIAVDAEQELANVDLAMH
SETLKDTAPVLEGIKFEKWQRYLRIKGEEITKEEIDMLSDACTKLKEQKKLLTKEKEELE
ELKGDVQEYNEDLEEIKKELSKTGKETIVEESKASKLLTKRVNRMIGRIDTLIVELEKGK
EVLDEQLDNDAASHAGLYFTFRENLISIDELISAMKKIQNIPHHKLQNIAESLDENKDGR
IDINDVIKVVKLIDKEDIDISTNQVAEILELLRKEEKVVEHQKAKEKSEKEQAAEVQN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcatgttgttcacgagctgccggccatcgctgtggaagacgcctaacgtagtg
tgtcggggggtgaggaaaggtggtgttggtgaaattgcctgtcttaagtgtattgcacta
aggttgacaagccacagaaatgtttggatcagaaattgcagcacaatatctacaagcagc
agtcctttgcacgtaagagatccttgtaataactggacaaaagggccaaaacgtttgtgc
tgtggtgtggtgggtgctcctctgccatgcccttctaccaacatgagttttattggaacc
agatatgtttcagtgaggtggtggcattctacgcatcaccgatatgatgattccaaagta
gaaaagtctctaaagtctctaaaggacaagaataagcgactggaggaaggaggtcctgtg
tatagtcctatagaacctgaagttcgcaggtcattgggtcagaagattgtagatgaagta
aaacactattatcatggcttcaggttgttgtggatcgacacaaagatagcaggaaggatg
ctttggcgaatcctgaacggatatgatctatcaagaagagagcatagacagtttctgagg
acatgtgctgacctctttcgcctggtgcccttcctggttttcataatagttccattcatg
gaatttcttcttcctgttgttgttaaacttttccctaatatgcttccttcaacttttgag
acaaagtcaaagaaggaagaacggttgaaaaaggagttgagagtgaagcttgaaatggca
aaatttcttcaagatacaattgaagagattgcgctgagaaacaaagcagctaagggagac
gtcacaaaggacttttctactttttttcagaagattcgagattctggagagagaccaagt
aatgaggagatcatgcgtttttctaaactgtttgaggacgagctaacattggacaactta
acacgacctcagctggtagcactttgtaaattgttggagctgcagtcaataggaaccaat
aactttctacgatttcaactgattatgaaactgcgcagcattcgtgcagatgatcagttg
attgcagaagaaggagtaaccacactgaatgtaaatgagctgcaggcagcctgccggact
cggggaatgagagcattaggggtgactgaagctcgcctgcaagaacaacttaaacaatgg
ttggagctacatctgaaccagcagattccaacttcacttctacttctgtccagggccatg
ttccttccagataccctttcacctgctgatcagcttacaacaactttgcagactttgcca
gatagtgtggcaaaggaagcgcaagtcaaagtcgcagaagtcgaatgtgacaaggtggac
aataaagcaaaattagaagcaaccttgcaagaagaggcagccatcaagagggagaaccag
gaacgagagttggaacgtatggcggaagctgctgaaaaagcgaaagaaagtttacaggtt
gaagccaggaaggaaattgaatcggcagtgaatctagaagcagcagcagtcaatgtgaag
caaagccagattgctgtggatgcagaacaggaattagctaatgtagacctggcaatgcat
tctgaaaccttgaaagatacagccccagtattagaaggaattaagtttgagaaatggcaa
agatatctacgcatcaagggtgaagagattacaaaggaggaaatagatatgctcagtgat
gcttgcacgaagttgaaggaacagaagaaactgctaaccaaagagaaggaagagctagag
gaattgaagggagatgtacaagagtataatgaggatttggaagaaattaagaaggaatta
tccaagactggaaaggaaacaattgtagaagagtccaaagctagcaagttattaacgaag
agggtaaaccgaatgatcggccggattgacacactcattgttgaactggagaaaggcaaa
gaagtgttggatgaacaactggacaatgatgcagcatcacacgctggtttgtatttcacc
ttcagggaaaatcttatcagcattgatgagctgatcagtgcaatgaagaaaatccagaat
atcccacatcacaaattacaaaacattgctgaatccttggatgaaaacaaggatggaaga
atcgatatcaacgatgtcataaaagtggtgaagttaattgataaggaggatatagacatc
tcaaccaaccaggttgcggagattttggaattattgcgcaaggaagagaaggttgtagaa
caccagaaagcaaaagagaagtcggagaaggaacaggcggcagaagtccagaattaa
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