Scyliorhinus canicula (smaller spotted catshark): 119963947
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Entry
119963947 CDS
T11175
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119963947 (rnf165a)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119963947 (rnf165a)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119963947 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_16
Prok-RING_4
RINGv
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
119963947
NCBI-ProteinID:
XP_038649316
LinkDB
All DBs
Position
3:43734720..43776432
Genome browser
AA seq
346 aa
AA seq
DB search
MVLVHVGYLVLPVFGAVSSRGAPFVRSQHSHATSCRQLHLSHQPEFPLSHSVQSQPGLSS
QLTSSHQHTTASLPLQQPLTSLPSPQFQDVPAFLPQSLHQQYLLHQQLLEAQQRRLLSFP
RRTQERAPPYPHRLRPGFDFSNHVHPASAVGVQPRYLTEGTDWDISVEAGLPHTQYQALP
VHRLHHYLATPRIQHFSRSMSSASVIIPDLRNYPYPHLHLLALQGLTGGRQSPAVRESYE
ELLQLEDRLGTVNRGAIQNVIEQYTFPHKYKTRMHKNLKGPKEDEEDTDFDEKCTICLCM
LEEGENVRRLPCMHLFHQVCVDQWLATSKKCPICRVDIEAQLLPDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgctagtacatgtcggctatcttgttcttccagtttttggagctgtaagcagcaga
ggtgcccctttcgtaaggtcacagcattctcatgccacttcctgcagacaacttcacctc
tctcatcaacccgagtttccactgtctcactctgtccaatcacagccaggcctgagcagc
caactgacgtcatcacaccagcacaccacggcctccttgccgctgcagcaacctttgacg
tctttgccaagcccacagttccaggatgtccctgcattcttacctcagtcattacaccag
caatatctcttgcaccagcagttgcttgaggcccagcagcgaaggttgttgtcgttcccc
agacggactcaggaaagggcccccccttacccccatcgtctacggccaggctttgacttc
agcaatcatgtccatcctgcttcagcagtgggagtacagcccaggtacctaactgaaggc
actgactgggatatcagtgtggaagctggattgccccatactcagtaccaggccctccca
gtacatcgcttgcaccattatctagcaactcccagaatacagcatttctccagaagtatg
tcttcagcatctgtgattattcctgatttgaggaattacccttatccacatcttcatctg
ctggcactccaagggttaactgggggtcggcagagtcctgcagttagggaaagttatgag
gaactgttacaactagaggacagacttgggactgtgaaccgtggggccatacagaatgtg
atcgagcagtacaccttccctcacaagtacaagacgagaatgcacaagaacctcaaagga
ccaaaagaggatgaagaggatacagactttgatgagaagtgtacaatctgtctatgtatg
ctggaggaaggtgaaaatgtcaggcggctcccatgtatgcacctgtttcaccaagtctgt
gtcgaccaatggctggccaccagcaagaagtgtccgatctgccgcgtagacattgaagca
cagctattaccagacagctga
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