Scyliorhinus canicula (smaller spotted catshark): 119964235
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Entry
119964235 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: LIM homeobox transcription factor 1-alpha-like
KO
K09371
LIM homeobox transcription factor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119964235
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
119964235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
LIM
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119964235
NCBI-ProteinID:
XP_038649446
LinkDB
All DBs
Position
4:121495908..121538898
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AA seq
345 aa
AA seq
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MTIENSTLSILLTNIWGLVPKLIELSHRLVKKQPDIVILTKLYIIDITINNPGLFAAKCS
GCMEVIAPTEFVMRAQKSVYHLPCFCCCVCCERQLQKGDEFVLQEGQLLCKSDYEXEREL
LSLVSPAASDSAKSDDEDCIGKLGQLQCKGGDDSKDPKRPKRPRTILTTQQRRAFKASFE
VSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLNTVPA
NTSNNPGMETMMNAYSSLPPQQLLAIEQNGYNTDPFRQGLTPPQMPGDHMHPYGNETLFH
DMDSDTSLNSLGDCLLATNEASSMQARIGNPIDRLYSMQNSYFTS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacaatagaaaactcaaccctgtcgatcctccttactaacatctgggggcttgtgccg
aaactgatagagctgtcccacaggctagtcaagaaacaacctgacatagtcatactcacc
aaattgtacataatagacatcaccatcaacaatcctgggcttttcgcagccaagtgcagt
ggctgcatggaggtcatcgcccccacggagtttgtcatgcgggcgcagaagagcgtctac
cacctgccctgcttctgctgctgcgtgtgctgtgagcggcagctccagaaaggggatgaa
tttgtgctgcaagagggtcagctgctctgcaagagtgactatgagnaagagcgggagcta
ctgagcctggtcagtccggccgcctctgactcagctaagagcgatgacgaggattgcatc
ggcaaactaggacagttacaatgtaaaggaggggatgactcaaaagatcccaaaagacca
aaaagaccgcgaacgattctgaccacacagcagaggcgtgccttcaaggcatcttttgaa
gtttcctccaagccttgcagaaaggtcagggagaccctggcagcagagacaggcctgagt
gttcgagttgtccaagtctggttccagaatcaaagagccaagatgaagaagttagctcgc
cggcagcagcaacagcagcaggaccagcagaacacccagcgactgaacacagtcccagcg
aacacctccaataatccggggatggaaacgatgatgaacgcttattcaagcctgcctcca
cagcagctcctggctattgaacagaatggatataacaccgatcctttccgacaaggtctc
actcctcctcagatgccgggagatcatatgcacccttatggtaatgaaacccttttccat
gacatggacagcgacacgtcactcaacagcttaggcgactgcctcctggcaaccaatgag
gcaagctccatgcaggctaggataggaaaccccatagatcgtctgtactccatgcaaaac
tcctacttcacctcatga
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