Scyliorhinus canicula (smaller spotted catshark): 119964291
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Entry
119964291 CDS
T11175
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119964291
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119964291
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
119964291
NCBI-ProteinID:
XP_038649495
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Position
4:234878454..234880958
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AA seq
834 aa
AA seq
DB search
MAHSARRLLLRRQAISSIFILCVLPLVPGHIRYSIPEELEHGSFVGNIAEDLGLTVEELS
NRKFRIVSDSAKHYFNANIRNGILFVSERIDREQLCAQGVSCVLALEAVIENPVQQYKID
VDILDINDNSPRFPHGETGLEIAEWTIPGTRFLLENAHDSDVGANSIREYQLISSHQFSL
DVQNRGEWQLLHLILEQPLDREKQSTHQLLLRAIDGGRPERSGTTKITVTVVDSNDNAPV
FQQSLHTAVLMEDAPPGTLIIKLNATDLDYGSNSDIIYSFSSYNKKWIRDLFSINPQSGE
VRVKGTLDFEEADAYEINVEAKDCGSPPLIAHCTVRVNILDVNDNAPILTFNSVSSKISE
DVQIGTLIALISVTDRDSHKNGLTDCQISQNLPFDLKSSFLNSYRLVIKELLDRERTAEY
KISVTCRDHGTPPLFSNKTIVVHLKDVNDNAPHFLKPSYTIHAMENTSPGTSIGTVAASD
PDMNQNSQLSYIILDGQIRGLPITSYVSMNPETGVIFSQRSFDYEALKSFEIHIQARDAG
LPPLSTNVTAKVIILDQNDNAPVVMSVGSAKVTVPRSAGPGYLVTKVIASDADSGQNARL
FYQFVQTTGTSSFTVSPRSGEVRTTRLLKDNQATSQRLVIQVKDNGHPPLSATATVTVTI
SEQSAEINHNSVQPHVDLQYSSNLAFYIIIALGLTSFILLVIIISLLIAICPADRSSPST
RSCFVTTCCCKSSLHSTERLQHSNVNLQIVPDSKLITKVLEVRGNGTLSDTYRYKVRSAP
EPSKMEFMFVTSSNPVTPGTMRKSTRTTKSEQSAKSANIWTGVSSEVSQNIHLH
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcacattcagcgagacgcttgctgctcagaaggcaagcgatatcgtccatttttatc
ctttgtgtgttgcctctggttcccgggcacatacggtactccattcccgaagaactggag
cacggatctttcgtcggaaatattgctgaagatttgggattaacggtggaggaactatcg
aatcgcaaattcagaattgtttcagactcagcaaaacattatttcaatgcaaacatcaga
aatggtattttatttgtaagtgaaagaattgacagagaacaactgtgtgctcagggtgta
tcgtgcgtcctggcattagaagccgttattgaaaatccagtgcaacagtataagattgac
gttgatattctggatataaatgataactccccgaggtttccacacggcgaaactggtttg
gaaattgccgaatggacgatacctggaacgcgctttctgttggagaacgcgcacgattct
gacgtcggagccaattctatccgtgagtaccagctcatttcgagtcaccagttctcttta
gatgtgcagaatcgtggagaatggcaattactccatttgatcctggagcagccactcgac
agggaaaagcagtcgacgcaccaattgctattaagagctatcgacggggggaggccggag
cgatcaggtactacgaaaataaccgtcactgtagtcgacagcaatgacaatgcaccggtg
ttccaacaatcactgcacacggccgttctcatggaagatgccccgcctggcactttgatt
attaagcttaatgccactgatttggattacgggtcaaacagtgacatcatttattccttc
agtagctataataagaaatggatacgagatctttttagcattaatcctcaatctggagaa
gtcagagtaaagggaacattggatttcgaagaagctgacgcctatgagattaatgttgaa
gcgaaggactgcggttctcctccactaatagcacattgcaccgttcgggtaaatattctg
gatgtgaatgataatgctccgatattgaccttcaattcggtttctagcaaaatctctgag
gatgttcagattggtacactgatagcgttgatcagtgtaactgaccgggatagccataaa
aacggactaacagattgtcagatttctcaaaacctcccatttgatctgaagtcttcattt
ttgaattcgtacagattagttataaaagagcttctggatcgggaaagaactgcagaatat
aaaatatcggttacgtgcagggatcatggcacaccaccattattcagcaacaaaactatc
gttgtacatcttaaagatgtaaatgacaacgcgccacattttctgaaaccttcatatacc
atccatgcgatggaaaatacttcgcctggaacctcgattggaacagtggcagcttccgac
cctgacatgaaccagaattcgcagctttcttacattattctggacggacagattcggggg
ttgcctataacgtcatacgtgtcgatgaacccggaaactggtgtcatcttttcacaacgt
tcatttgactacgaggcactgaaaagctttgagatccatattcaagctcgagatgcggga
cttccaccactgtcgactaatgttactgcaaaagtgattattctcgatcagaacgacaac
gctcctgtagtaatgtcagtcgggtcagccaaggtaacagtgcctcgatctgcgggtccg
ggttacttagttactaaagtaatcgcatcggatgctgattctggtcagaacgcgcggctt
ttctatcaatttgtgcaaaccactgggaccagttcgtttactgtttcgcctcgttctgga
gaagtccgaactactcgtctccttaaagacaaccaggcaacctcacaacggctggttatc
caggtaaaagataacggccacccacccctctcagccactgccactgtcacagttacgata
agtgaacagagtgcagaaataaaccacaattctgtgcaaccccatgtggatttacaatat
tcttcaaacctagctttttacataataattgcattggggttaacatcgttcatactcctg
gttattataatttcccttcttatcgccatttgtccagccgacagaagttctccttctact
cggagttgttttgtaaccacttgttgttgcaagagttcattgcactctaccgaacgtttg
caacattcgaatgtcaatcttcaaattgtgccggattctaaattaattacaaaagtgctt
gaagttcggggaaacggaaccctttcagacacataccgttataaagtgcgatcagctccg
gaaccaagtaaaatggaattcatgtttgtgacatcatccaatccggtaacgcctggaacc
atgaggaaatcaacaagaacaactaagtcagaacagagtgcaaagtcagcgaacatctgg
actggtgtctccagtgaggtgagtcaaaacatacatctgcactaa
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