Scyliorhinus canicula (smaller spotted catshark): 119964293
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Entry
119964293 CDS
T11175
Name
(RefSeq) protocadherin alpha-C2-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119964293
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119964293
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119964293
NCBI-ProteinID:
XP_038649497
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Position
4:234914721..234917177
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AA seq
818 aa
AA seq
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MTESSNRSVLISSIFLLCAWSLVSGQIRYSIPEELEYGAFVGNIGQDLGLTVGERSHRRF
RMVSASSMQYLDVNLMNGILFVNKRIDREQLCGQTVTCLLYLEAVVENPVEQYRVEIEIL
DINDNSPSFPNSEIHLEIAESAVPGARYLLEHANDLDGGNNSIRTYQLTANEHFSLDVQS
RGKWKLPELVLENILDREKQTRYRLLLTAFDSGSPEKTGTAHITINILDTNDNAPVFRKS
LYTVSLMENVPPGTLVIKLNATDMDEGPNGEMTYSFSSYNEKSIPKTFRINSTSGDIQVK
GLLDFEEASIYEIDVEVKDSGSPPLSAHCSVRVEIKDINDNPPDLMLNSILRKISEDAPI
GTLIALISVTDQDFNNNGFTDCSISPNVPFDLKSYFKNSYRLITNDVLDRESAPQYNIWV
MCKDRGVPPLAANKTIAVQISDINDNEPRFTQASYKFYVTENNAPGSFIGSVTAFDPDMD
QNSQVSYEMVQNQLQALPMSSYVDINPTNGTIYSKRPFDYEQLKSFQIHVQAQDSGLPLR
SSIVAVNVIVLDQNDNPPVIVSPGSRKYTNSSVPRSADPGYLVTKIVASDADSGQNGRLF
YRVIQSSDPGLFSVSHNSGEVRSVRRFKDSDANMQRLIVQVKDNGYPALSATATVTLLIV
EQSIDIQPDFTEPHKDTQDSQRLTIYIIISLGATSFVLLVVIIGLIVAICPNGRAPYGRV
CSLNNCCCTREYQNSNINDQIVPDSNLFPNILEVRGNGSLSDTYRYKIRSAPESAEIFFS
PQKPGTPGRNAMYVSQQSGKLNNNWPDAFHEVSSSHRI
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcgagcaatcgctcggtgctgatatcatccatctttctgctttgtgcctgg
agcctggtttccggacagatccggtactccattcccgaagaactagagtatggtgccttc
gtcggaaatatcggacaagatttgggtttgactgtgggggaacgatcacaccggagattc
agaatggtatctgcctcgtccatgcaatatttggatgtaaatctcatgaacggaattcta
tttgtgaataaaagaatagatagggaacaactctgtggacaaactgttacctgtttactg
tatttagaagcagtagttgaaaaccctgtggagcagtaccgggtggaaattgagattctg
gatataaatgataattctcccagttttccgaacagtgaaattcatttggaaattgcagaa
tcagcggtgcctggagcgcgctatctcttagagcatgcgaatgatcttgatggaggaaac
aattcaatccgaacataccagctcactgcaaatgaacattttagtttagatgtgcagagt
cgtggaaaatggaaattgcccgaattagtcttggagaacattctcgatagagaaaaacaa
acaagatatcgtttattgctgacagcgtttgacagtggatctccagaaaagacaggtacc
gcgcatataacgattaatatcttggacactaatgataatgcaccggttttccggaagtcg
ttgtacactgtcagtctcatggaaaacgtgccaccgggcactttggtgattaaacttaat
gctactgatatggacgaggggcctaatggtgagatgacatactcgtttagtagttacaat
gaaaaaagcatacctaaaacttttaggattaattcaacgtcgggggatatccaggtaaag
ggtttattggattttgaggaagccagtatttatgagattgatgtggaagtgaaggacagt
ggttcgccaccattatctgcgcactgcagcgtgcgagtggagatcaaagatatcaatgac
aatcctccagatttgatgctaaattcaattttgcgtaaaatcagtgaagatgctccaatt
ggaactctgattgcattgatcagtgtaacagaccaagatttcaataacaatggatttacg
gattgttcaatttctccaaacgtcccctttgatctcaaatcttattttaaaaattcgtat
agactcatcacgaatgatgtgcttgaccgggaaagtgctcctcaatataacatttgggtc
atgtgtaaggaccgtggagttcctccgttggccgccaacaaaacaatcgctgtgcaaatt
tcagatataaatgacaatgagccgcgcttcacacaggcttcatataaattctatgtcaca
gaaaacaacgcccctggtagtttcattggatcagtgacagctttcgatcctgatatggac
caaaattcacaagtttcttatgaaatggtgcagaaccagcttcaggcgctgcccatgtct
tcttacgtcgatattaacccaacaaatggcactatatattcaaagcgtccatttgattac
gaacagcttaaaagttttcagattcatgttcaagctcaagactctgggttgccattgcgt
tcaagcattgtagctgtgaatgtgattgtccttgaccaaaacgataatcctcctgttata
gtatcgcctggatcacgaaaatataccaattcaagtgtgcctcgatctgcagacccagga
tatttggtaacaaagatcgttgcttcggatgctgactctggtcagaatggtcgacttttc
tatcgagttatacaatccagtgacccaggccttttttctgtctcacataattcaggagaa
gtgagaagtgttcgacgatttaaagatagcgacgccaacatgcaaaggttaattgttcaa
gtgaaagacaatggatatccagccctctctgccacggccactgttaccctgttgatagtt
gaacaaagtatagacattcaaccggattttactgaaccccacaaggatacccaggattcg
cagagattaaccatttatataataatttctttaggagcaacgtcgtttgttctgttggtc
gtaataattgggcttattgtggctatatgcccaaatggtagagctccttatggtcgggtt
tgttctctcaataattgttgctgcaccagagaatatcagaactcaaatataaatgatcaa
attgtaccggattctaatttatttccgaatattctcgaagttcgtggaaatggatccctt
tcagatacttaccgatataaaattcgttcagcgccagaatcagctgaaatatttttcagt
ccgcaaaagcctggaactcctgggaggaatgcaatgtacgtttcacagcagagtgggaag
ctgaataacaactggcccgatgcatttcatgaggtgagcagttcacacagaatttaa
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