Scyliorhinus canicula (smaller spotted catshark): 119964328
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Entry
119964328 CDS
T11175
Name
(RefSeq) afadin- and alpha-actinin-binding protein-like isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04517
IgSF CAM signaling
scau04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119964328
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119964328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119964328
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
119964328
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Motif
Other DBs
NCBI-GeneID:
119964328
NCBI-ProteinID:
XP_038649566
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Position
4:6568041..6623422
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AA seq
622 aa
AA seq
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MGDWTAVIMPEQEPSPDSKEFIYRYTSRSQMSPNNSFIETLPLFTSHNLSLFCTKENVDQ
CIAYLNQELTTLGFPSLYTEEAERELNLETILNCMYDLLQLHRKGLRMLEDMETQKLKSS
SDMDHLYHSQVKLKDQLELSRREVISFQEKDRQLQLKNRTLHNLLKNEKEEIQKLQNIIA
SRATQYNHDLKRKEREYNKLKERLHQLVMDKKDKKLCIDILNYVGRSDGRRSAWRTGKTE
ARNEGEMYKSLMNNYERHHKELMVENIELKQVLQQMKKDMMSILNRRKQRPKEHVEDCSG
IAGSDNEEDSRESNKENSLELSCDAVREQLTNSIRQQWRILKNHVEKLDSQASLVKPGFH
NDDEVISIADHDQEIEKLQGEIQQCRDVIKAQQQLLQQQLNAQYDDETAALVRDCYLLEE
KERLKEEWRLFNDQKKNFERERRNFTEAAIRLGHERKGFEEERATWLKQQFLNMAPFVES
KRPKIRKPQSALSISAEQEHKIQSQPNMSAYLRPNTAPVAAPELSTNTKFPPICSAASTE
TGRTVPLTPETSSKLVPKRGNVGTYDVKKNSGGAAHEKCRSTSKPSSDHRYSNGCSSLWN
HSQEDNYLDENSLQSANESNLK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggagattggacagctgtaatcatgccagaacaagagccatcgccagacagcaaagaa
tttatctatcgttacacatccagatcacaaatgtctcccaacaacagcttcattgaaaca
ttgcctttatttaccagtcataatttaagtttgttttgcacaaaggagaatgtcgatcaa
tgcatagcatacctcaatcaggaactcactacattgggttttccatccctttacactgaa
gaggctgagagagagctgaacctggagaccattctaaattgcatgtatgatctgctacaa
cttcatcgcaaaggccttcgtatgctagaagatatggaaacgcaaaaacttaaatccagt
agtgatatggaccatttataccacagccaagttaaactaaaggatcaactagagttgtct
cgtagagaagttatatcctttcaagagaaggacaggcagctacaactgaagaaccgaacg
ttacacaatttactcaaaaatgaaaaggaagagatacagaagttgcagaatataatagcg
agccgcgctactcagtacaaccatgacctgaagagaaaggagcgggagtacaataaactg
aaagagcgcttacaccaacttgtaatggataagaaagataaaaaactatgtattgacatc
ctgaattatgtgggacggtctgatgggcgacggagtgcatggaggactggcaaaacggaa
gccaggaatgaaggggaaatgtacaaatctcttatgaacaactatgaaaggcaccataaa
gaactaatggtggaaaatattgaactgaagcaagttctacagcagatgaaaaaagatatg
atgtctatacttaatcgtagaaagcagagaccaaaggaacacgtggaagattgcagtggt
atagcaggctcggataatgaagaggattctcgcgaatcaaacaaagaaaatagtttggag
ctttcttgtgatgcagtcagagagcagctcaccaacagtattcggcaacagtggagaatc
ctgaaaaaccatgttgagaaactggactctcaagcatccttggtgaagcctggttttcat
aacgatgatgaagttatcagcatagctgatcatgatcaggaaattgagaagctacaggga
gaaattcagcaatgcagggacgtgatcaaagcccaacaacagctattacagcaacagctg
aatgcacagtatgatgatgaaacggctgcattagtgcgagactgctacttactcgaggaa
aaagaacgattgaaagaagagtggagactatttaatgatcagaagaaaaactttgaaaga
gagagaaggaactttacagaagcagctattagactggggcatgagaggaagggttttgag
gaagaacgagcaacatggttgaagcagcagtttttgaacatggctccttttgtggagagt
aaaaggccaaaaataaggaagccacaaagtgccttgtctatcagtgctgagcaggagcac
aagatacaatcacagccaaatatgtctgcttacctccgacctaatacagctccagtagct
gcacctgaactgtcaaccaataccaaatttcctccaatatgtagtgccgcatccacagaa
acgggtcgaacagttcccctcactccagaaactagctcaaaacttgtaccaaaaagaggg
aacgtgggcacttatgatgtaaagaaaaacagtgggggagcagctcacgagaagtgcagg
agcacttcaaagcccagctctgatcaccggtattctaacgggtgttcttcactttggaac
cattcgcaggaggacaactatttggatgaaaattctttacagtctgcaaatgagtctaat
ctcaaatga
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