Scyliorhinus canicula (smaller spotted catshark): 119964425
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Entry
119964425 CDS
T11175
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau02010
ABC transporters
scau04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119964425 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119964425 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119964425 (abcd3a)
Enzymes [BR:
scau01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
119964425 (abcd3a)
Transporters [BR:
scau02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
119964425 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
SMC_N
AAA_21
AAA_27
BrxL_ATPase
AAA_29
AAA_16
Rad17
Motif
Other DBs
NCBI-GeneID:
119964425
NCBI-ProteinID:
XP_038649809
LinkDB
All DBs
Position
4:24078033..24142451
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AA seq
583 aa
AA seq
DB search
MVPGMVSQETAYLMLIAAMLVARTYCDVWMIQNGTMIESAIIGRSTKDFKRYLFNFVAAM
PAISLVNNFLKFGLNQLKLRFRVRLTTYLYEEYLKGYTYYKMGNLDNRIANADQLLTQDV
EKFCNSVVDLYSNLSKPLLDIFLYIFKLASAIGAQGPTSMMAYLIVSGLFLTRLRRPIGK
MTVSEQRYEGEYRYVNSRLITNSEEIAFYHGNSREKQTIHTTFKRLVDHLHNFIVFRFTM
GFVDSIIAKYLATVVGYLVVSRPFLNLSHTRHLKSNHAELLEDYYQSGRMLLRMSQALGR
IVLAGREMTRLSGFTARITELMQVLKELNSGKYERTMVSQQDRGSKRIPLIPGSGEIIIM
DHVIKFEHVPLVTPNGDVLIPDLSFEVKSGANVLVCGPNGCGKSSLFRCLGELWPLFGGR
LTKPDRGKLFYVPQRPYMTLGTLRDQVIYPDTVEEQRRKGISDQVLKEYLDNVQLGHILE
REGGWDSIQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKV
GITLFTVSHRKSLWTHHEYYLHMDGRGNYEFKPITADTVEFGS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctggaatggtttcacaagagactgcgtacctgatgctcattgcagcaatgctt
gttgctcgaacctactgtgatgtctggatgattcaaaatgggaccatgattgaaagtgca
attattggtcggagcaccaaagatttcaagagatacttattcaactttgttgcagcaatg
ccagcgatatctttggtaaataatttcctgaagtttggcttgaatcagttgaaacttcga
ttcagagtaagactcaccacctacctgtatgaggaatacttaaaaggttatacctattat
aaaatgggtaatcttgacaacagaatagcaaatgcagaccaactattaactcaagatgtg
gagaagttctgcaacagtgtagtagacttgtattcaaatctcagcaagccccttttggac
atctttctgtatatattcaaactagcaagtgcaataggtgctcagggccctacaagcatg
atggcttacctgatcgtttcaggcctgtttttgactcgccttcgaagaccaattggtaaa
atgacagtgtcggaacaaagatatgaaggcgaatacagatatgtcaattcacggcttatc
acaaatagtgaagaaattgctttttaccatgggaacagtagagagaaacaaactatacat
actacgtttaaaaggctggttgatcacctacacaatttcattgttttccgcttcaccatg
ggatttgtggacagtataattgccaaatatcttgctactgttgttggttatctggtagta
agccgacccttcttgaatctctctcacactcgccatctgaaaagtaaccatgctgaattg
ttggaggactactaccaaagtggtcgtatgttactgagaatgtctcaagcacttggaagg
attgtgttggctggtcgtgaaatgacaagattgtctggcttcacagctcgaatcactgaa
ttaatgcaagttttgaaagagttaaatagtggaaaatatgaacgcacaatggtttcccag
caggataggggttctaaaagaatacctttgatacctggcagtggggaaatcattattatg
gatcatgttatcaaatttgaacatgtgccattggtgacaccaaatggggacgttctgatt
ccagacctttctttcgaggtgaagtcgggggcaaatgtcctggtctgtggtccaaatgga
tgtgggaagagctcactcttccgttgtttaggagagctgtggcccctatttggaggacgt
ctgacaaaaccagaccgagggaagctcttttatgtaccacagcgaccgtatatgaccttg
ggaactctgagggatcaggtaatctatccagacacagtggaagaacagaggcggaaagga
atatctgatcaggtactgaaggagtatttagacaacgtccaacttggccacattctggaa
cgtgagggaggctgggatagcattcaggactggatggatgtactcagcggaggggaaaaa
caacgaatggcgatggctcgattattctaccacaaaccacaatttgctattttagatgaa
tgtaccagtgcagttagtgtggatgttgaaggttatatctacagccactgcagaaaggtt
ggcattactttgttcactgtgtcacacagaaaatctctctggactcaccatgagtattac
ctgcacatggatggcagagggaattatgaatttaagccaattactgctgatacagtggaa
tttggttcttaa
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