Scyliorhinus canicula (smaller spotted catshark): 119964523
Help
Entry
119964523 CDS
T11175
Symbol
slc6a9
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119964523 (slc6a9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119964523 (slc6a9)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119964523 (slc6a9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119964523
NCBI-ProteinID:
XP_038650041
LinkDB
All DBs
Position
4:complement(41876314..42136178)
Genome browser
AA seq
626 aa
AA seq
DB search
MVKRDENLKRGNWSNQIEFILTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYIIMLVFCG
IPLFFLELSFGQFTSQGCLGVWRVNPMFKGVGYGMMVVSTYIGIYYNVVISIAFYYFFSS
MTTLLPWTYCTNEWNREDCSSMLDPNRTANISDLSQNISTLLNQTAKRTSPSEEYWNYYV
LKLSDGIGDLGEVRLPLLGCLFVAWVVVFLCLIKGVKSSGKVVYFTATFPYVVLTILFIR
GITLDGAVTGIKYYLTPQWDKILDAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCY
RDSIIISITNCATSVYAGFVIFSILGFMAAHLGVDVSKVADHGPGLAFVAYPEALTLLPI
SPFWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGSDWIRRKKSLVTLTVAIVGFLLGI
PLTTQAGIYWLLLMDNYAASFSLVVISCIMCIAIMYIYGHDKYFQDVQMMLGFPPPMFFQ
ICWRFVSPSIIFFILVFTVVQYKPISYNDYVYPSWAITLGILMALSSVICIPVYAIWKIC
MSEGSTFWERVKNANKPSKDWGPSLLEHRTDRYATVGSPSYEFNLEIQQLNPDKEREKEQ
LPTENIEHNFTIQGSNGSARTQEPNV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagagatgaaaacttgaagcgtgggaactggtctaatcaaatagaattcatc
ctgactagtgttggatatgctgtaggtcttggaaatgtctggagattcccttacctgtgt
taccgaaatggtggaggtgcctttatgtttccctatatcatcatgctggtcttctgcggt
attcctcttttttttctggagctttcctttgggcagttcaccagccaaggctgccttggt
gtgtggagggttaaccccatgttcaaaggagtggggtatgggatgatggttgtttccacg
tacattgggatctactacaatgtggtcatttccatcgccttctactacttcttctcctcc
atgactacgcttttgccatggacgtactgcactaacgagtggaacagggaagactgcagt
agcatgctggaccccaacagaactgccaacatcagtgatctgtcacaaaacatctcaaca
ttgctgaaccaaactgcaaagcggaccagccctagtgaggagtactggaattattacgtg
ctgaagctgtccgatgggattggagaccttggggaggttcgcttgccattgctgggctgt
ctatttgtggcctgggttgtggtcttcctctgcctcattaaaggggtcaagtcgtcggga
aaagtggtgtacttcacagcaactttcccatatgtggtgctgacaattctgttcatccgt
ggaattactctggatggagctgtcactggcatcaagtactatctcacgcctcagtgggac
aagattttagatgcaaaggtctggggtgatgctgcttcccaaattttctactccctggga
tgtgcgtggggtggcctgataaccatggcatcttacaacaagtttcacaataactgctac
agggacagtatcatcatcagtattaccaactgcgcgaccagtgtttatgctgggtttgtc
atcttctccattcttggattcatggctgcacatctaggagtcgacgtgtcaaaagtagca
gaccatggtcccggactggcctttgtggcatacccagaagccctgacattactgccaatc
tcacctttctggtcccttctctttttcttcatgttgattctgctgggcctgggcacacag
ttctgcctgttggaaacattggtcactgctgtcgttgatgaaattggcagtgactggatc
cgaaggaaaaaatccttagtgactctgacagttgccattgttggctttcttctgggaatc
cccctgactacccaagctggcatttactggcttctcctcatggataactatgcagctagc
ttctcacttgttgtgatttcttgcattatgtgcatcgccatcatgtacatctatggacat
gataagtatttccaggatgttcagatgatgcttggctttccgcctccaatgttcttccaa
atctgttggcgttttgtgtcacccagcattatttttttcattctggtgttcactgtggtc
cagtataagcctatcagttacaatgattacgtttatccatcctgggctatcactcttggc
atcttgatggcactctcctcagtaatttgtatcccagtttatgccatttggaagatatgc
atgtcagaaggctccacattttgggagcgtgtgaaaaatgcaaataaaccaagcaaggat
tggggacctagtctattagagcaccgtactgaccgatatgcaacagtgggtagtccatcc
tatgagttcaatcttgaaattcagcaactgaatccagataaagagcgggagaaggagcaa
ctaccaacagaaaatatagaacataacttcaccatacagggcagcaatggttctgccaga
acacaggagcctaatgtgtag
DBGET
integrated database retrieval system
