Scyliorhinus canicula (smaller spotted catshark): 119964640
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Entry
119964640 CDS
T11175
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03082
ATP-dependent chromatin remodeling
scau03083
Polycomb repressive complex
scau04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119964640
03083 Polycomb repressive complex
119964640
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119964640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119964640
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119964640
Histone modification proteins
HAT complexes
HATB complex
119964640
HDAC complexes
Sin3A-HDAC complex
119964640
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119964640
PRC2.2
119964640
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119964640
Heterochromatin formation proteins
Other heterochromatin formation proteins
119964640
Chromatin remodeling factors
NuRD complex
119964640
NuRF complex
119964640
NuRF complex (fruit fly)
119964640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
119964640
NCBI-ProteinID:
XP_038650316
LinkDB
All DBs
Position
1:83111536..83169853
Genome browser
AA seq
479 aa
AA seq
DB search
MTDKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQHTADPLEVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL
LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGQVS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcacctgtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgctgtggaa
gaacgtgtcattaatgaagaatacaagatctggaagaaaaacactccctttttgtatgac
ctggttatgactcatgctctggaatggcccagtctgactgcccagtggttacctgatgtc
tctagacctgaggggaaggactacagtgttcacaggctggtgctgggaacccatacatct
gatgagcaaaaccatctggttatagccagtgttcagctaccaaatgatgatgcacagttc
gatgcttcacactatgatagtgaaaagggagaatttggtggatttggttctgttagtgga
aaaatagagattgaaataaaaataaaccatgaaggggaagtaaatcgtgcccgctacatg
cctcaaaatccgtgtattattgctacgaaaactccctccagtgatgtgttggtctttgat
tataccaaacatccttccaaaccagatccctctggtgaatgcaatccagatcttcggtta
cgtgggcaccaaaaggaaggatatgggctttcgtggaatcccaacctcagtggccatcta
cttagtgcttcagatgatcataccatctgcttatgggacatcagtgctgtacctaaagaa
ggaaaagtagttgatgcaaaaactatctttactggtcacacagcagtagtggaagatgtg
tcatggcacttgctgcatgagtctctgtttggttccgtggcagatgatcagaaactaatg
atctgggataccagatctaacaacacatcaaagccaagccattctgttgatgcacacaca
gcagaagtgaactgtctttccttcaatccttacagtgaatttatcttggcaactggttct
gctgacaagactgtggcattgtgggatttaagaaacctgaaactgaagttgcattccttt
gaatcacacaaggatgagatcttccagcacacagcagatccgcttgaggttcaatggtct
cctcataatgaaacaatcctggcatcaagtggaacagatcgcagattgaatgtatgggat
ttgagtaaaattggagaggaacagtctcctgaagatgcagaagatggtcctccagagctg
ttgtttatccatggtggtcacaccgctaagatttcagatttttcttggaacccaaatgag
ccatgggtaatttgctctgtatctgaagacaatatcatgcaagtgtggcagatggctgaa
aatatttacaacgatgaagatcctgagggagcccctgatccggaaggtcaagtctcatag
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integrated database retrieval system
