Scyliorhinus canicula (smaller spotted catshark): 119964684
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Entry
119964684 CDS
T11175
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7 isoform X1
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119964684 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scau03037
]
119964684 (efcab7)
Cilium and associated proteins [BR:
scau03037
]
Primary cilia and associated proteins
EVC complex
119964684 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_5
EF-hand_6
EF-hand_8
EH
EF-hand_FSTL1
SPARC_Ca_bdg
EFhand_Ca_insen
AIF-1
MCLN_ECD
EF_assoc_2
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
119964684
NCBI-ProteinID:
XP_038650415
LinkDB
All DBs
Position
4:complement(76170108..76320838)
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AA seq
611 aa
AA seq
DB search
MSNQQGSIASTSAKPVKSESGKSQCIEEDNFYRNCRAAYLTVFGTSLENITSKDQLCLVL
QQAGRNPSRKMLGKYWTQYTKRLNFDDFCEIMKNEKLTGKNELMKAFKKLDLNNDGYITH
EELYKVLTTKGEKMTHEEVKMIMDEADVNNDGKLDYNEFCKLFLATVETSQKTAVAKLEA
NAKIKQQQFGSLIAASPSQNPETEIIPRKVESRLSSRPSSARSRRASISSAISMGATTTK
STKLMEPKAIKNWQHVWSKGCFFLEEDGGIVNHRYRLELHQTTNVFLTIRPLNLSQTEEK
LSPWMNVDTALYVLRNAGGSEALEVVCATELREKEMFGWKGELRSGVYQLLPFTTGCRLR
KRRKSVTREAKLVHRENGSLTLSKEFRAALSDIFEVIDLNGNGLLSFEEYNFFELRTSGE
KCDSEAWAVCRENFDTKKNELTRQGFMDLNLMEANDREGDPRDLWVTLESMGYSKTLEMH
EACPFVINIYAENSKLKLTPVSLEMGGGHLNSAICKYVIRKGEAKAMKDYNNLVIHIYKT
ETQITSVIENKSETRVIVHVNNEQSKNCVSSRGLSIFAVEVAPRTTTVCQHVMPVNERLE
WIYCCTESVVT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcagcaaggcagcatcgcatctacttcagccaagcctgtgaaatctgaatct
ggcaaatctcagtgcatcgaagaagataatttttatagaaactgccgagcagcttacctg
acagtattcggaaccagtttagagaatatcacatccaaagaccaactctgtctagtgctc
cagcaagctggaagaaatccttccagaaagatgcttgggaagtactggactcagtatacc
aagcgattaaactttgatgacttttgtgaaatcatgaagaatgaaaagctcacaggcaag
aatgaattaatgaaagctttcaagaagctcgacttaaataatgatggctacattacacat
gaggagctttataaagttcttactactaaaggtgagaagatgacacatgaagaagtgaag
atgatcatggatgaagctgatgttaacaatgatggaaaattggattataatgagttttgt
aaactattcttggcaacagttgaaacaagtcaaaagactgcagtagcaaaattagaggct
aatgccaagataaagcagcaacagtttggaagtttaatagccgcttcaccgtctcaaaat
ccagagaccgaaataatccccagaaaagttgagagcagactttcatcaagaccctcatct
gctcgaagtcgcagggcctcaatttcttctgccatcagtatgggagctaccaccacaaaa
agtacgaaattaatggagcccaaagcaataaagaattggcaacatgtttggtcaaaggga
tgttttttcctcgaggaagatggtggaattgtcaatcatcggtatagactggaattgcat
cagacaacaaatgtttttctcaccatcagaccattaaacctcagccaaactgaagaaaaa
ttatcgccctggatgaatgtggatactgcattatatgttttgaggaacgctggtggttct
gaagctctggaggtcgtatgcgccacagaattacgggaaaaggagatgtttgggtggaag
ggagagcttcgttctggagtttatcagctcctcccttttaccactggctgcagactaagg
aaaaggaggaaatcagtgacacgagaggcaaagttggtacacagggaaaatggaagcctc
acactcagcaaggaattcagggctgctctgtctgacatctttgaagtaatcgatttaaat
ggcaatgggctactgagctttgaagagtataatttctttgagttgaggaccagtggagag
aaatgcgacagtgaggcctgggctgtgtgccgggaaaattttgacacaaagaaaaacgag
ctgacacgccagggtttcatggacttgaacctgatggaagccaatgatcgggaaggtgat
ccaagagacctctgggtgacacttgaatcaatgggttatagcaaaacactggaaatgcat
gaggcatgcccttttgtaattaatatctatgcagagaacagcaaacttaagctgacacca
gttagtctggaaatgggtggaggccatctcaattcagctatctgcaaatatgtcataaga
aaaggagaagcaaaagccatgaaggattacaacaatctggtgattcacatctacaagact
gaaacacaaatcacttcggtcattgaaaataaatctgaaacaagagtgattgttcatgtc
aacaatgaacagagtaagaactgtgtcagcagtcggggactaagtatttttgcagtggaa
gtagcaccaaggacaactacagtctgtcagcatgtgatgcctgtcaatgagaggctggaa
tggatttactgctgcacagaaagtgttgtgacctga
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