Scyliorhinus canicula (smaller spotted catshark): 119964708
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Entry
119964708 CDS
T11175
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor-like
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04020
Calcium signaling pathway
scau04080
Neuroactive ligand-receptor interaction
scau04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119964708
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119964708
04081 Hormone signaling
119964708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scau04030
]
119964708
G protein-coupled receptors [BR:
scau04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
119964708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_4
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
119964708
NCBI-ProteinID:
XP_038650550
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Position
1:complement(277456142..277669997)
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AA seq
816 aa
AA seq
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MSSVIYLVFLISWNIVYHTCVQTYHCPEICQCSMQFVRCTKETAARLPAAISRTFSSLRF
THLPLKKIQGHSFEGLHNIIRIDISQSDSLERIQSKAFVDLLDLVELSIQNTKHLVKIDQ
EAFRNLPRLRYLSICNTGIGFFPDLTHIHSIASNFILEICDNLRLQTIPENAFQGMNNES
LTLKLYKNGFEDVQSHAFNATKLDKLELNENKNLRTIHNDAFKGAIGPDVLDVSSTALEH
LPSYGLEFIQKLTARFTYSLKRFPALEKFVNLMEANLTYPSHCCAFKNWEKSNGFGNDYS
HPGLPPLQLGERSLQNHSSGVKKHPSSQNGSHFPENMSDAEYEHLEEIYENSVSFDYGFC
HSKVDLICTPEPDAFNPCEDIMGYNILRVLIWFINILAIVGNFVVFIVLVISQNKLTVPR
FLMCNLAFADLCMGLYLLLIASVDLSTRSQYYSYAIDWQTGAGCASAGFFTVFASELSVY
TLMVITFERWHTITHAMQMDRKLRLRHAIVIMTGGWIFSLVVATLPLVGISNYMKVSICL
PMDIETPMSQAYIIFLLVLNVMAFIIICVCYIKIYLAVKNPDFVSKSSDAKIAKRMAILI
FTDFMCMAPISFFAISAAFKSPFITVTNAKILLVLFYPLNSCANPFLYAIFTKAFRRDFF
ILLSRFGYCEMQAHIYKTDNSSSKSGSKENSGAAVKLTTFSVQDLPAGANKGMVVVGRGF
VQSYYNSHVLILSQNNSAALQYKKFCIHTDGITTFFKKLDACDRFLCIALRDLLSIFTTF
RFVFQISNIRSILLLNYSSVSLITIAEKLLESIRRE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagttatttatctggttttcttgataagttggaatattgtgtatcacacttgt
gtgcaaacttatcactgtcctgagatctgccagtgctccatgcagtttgtcagatgcacc
aaggaaactgctgcccgcctccctgccgcgatttcccgcaccttctccagcctgaggttt
actcatctgccactgaaaaagattcaaggacattcttttgaaggacttcataatatcata
agaattgatatttcccaaagcgattccctggagagaattcaatctaaggccttcgttgat
cttctggacttggtggaactctcaattcagaatacaaagcatctggtgaaaattgatcaa
gaagctttcagaaatctaccacgactaagatacttgagcatttgtaatactggaatagga
ttctttcctgatctgacacacatccactcaattgcatccaattttattctggaaatatgt
gacaatttacgccttcaaaccatacccgaaaatgcatttcaaggaatgaacaatgaatct
ctaacattgaagctgtacaaaaatggattcgaagatgtgcaaagccatgcattcaatgcg
acgaagctggataagttagaacttaatgagaataaaaatttaagaacaatacacaatgat
gccttcaagggagctattggaccagatgtattggatgtttcctcaacagcacttgagcac
cttccatcttatgggttggaatttattcaaaaacttactgcccgcttcacgtactcactg
aaaagattcccagcactggaaaagtttgttaatttgatggaagcaaatttgacatatccc
agccactgctgtgcattcaaaaattgggaaaaatcaaatggtttcgggaatgactactct
catcctggtctaccaccactgcaacttggagagaggagcttacagaatcattcttctgga
gtgaaaaaacacccttcttcacagaatggttcacactttcctgaaaatatgtctgatgct
gaatatgaacatttagaagaaatatatgaaaattcagtatcatttgattatggcttttgt
cattcaaaggtagaccttatctgtactccagaaccagatgccttcaacccatgtgaagat
ataatgggttacaacatcctaagagttttgatatggttcattaatatccttgctattgtg
ggtaactttgttgtttttattgttttggtgattagtcagaataagctcacagtcccacgt
ttcctcatgtgcaatcttgcttttgctgacctctgtatgggtctctatttgctacttatt
gcatcagttgacttgagcaccagaagtcagtactacagctatgctatagactggcagact
ggtgctggatgtgccagcgctggcttcttcactgtttttgcaagcgagctctctgtgtac
acgctgatggtgatcaccttcgaaagatggcacactattacccatgccatgcaaatggac
aggaagctccgattaaggcatgccattgtgattatgactggaggctggatattctctctt
gttgtagcaacgctgccacttgtgggaatcagcaattacatgaaagttagcatctgtttg
cccatggatatagaaactcccatgtcccaagcttacatcatattcctcttggtactgaat
gttatggcctttattatcatttgtgtttgctatatcaaaatatatttagctgtgaaaaac
cctgactttgtttctaaaagtagtgatgcaaaaattgcaaaacgaatggcgatactgatc
tttacagacttcatgtgtatggcacctatatcgttttttgccatttcagcggctttcaag
tcaccttttattacagtgaccaatgcaaaaattctgctagtattattttatccgctcaac
tcctgtgcaaatccatttctctatgcaatcttcacaaaagcattcagaagggacttcttc
atcctgttgagcaggtttggttactgtgaaatgcaggcgcacatttataaaactgacaac
tcaagctcaaagagtggcagcaaggaaaactcaggggcagctgtcaagctaacaactttc
agcgtgcaggatctgccagccggtgcaaacaaagggatggtggtggtggggagggggttt
gttcagagttattacaattctcatgtattgatattatcacaaaataattctgcagcactt
caatataaaaaattctgtattcatactgatggaataactactttttttaaaaagctggat
gcttgtgaccgtttcctctgcatcgcgctgcgagacctgctgagcattttcaccactttc
aggtttgtatttcagatttccaacatccgcagtattttgcttttgaattatagctcagtt
agcctaataactattgctgagaaattactagaatctataaggagggagtga
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