Scyliorhinus canicula (smaller spotted catshark): 119964817
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Entry
119964817 CDS
T11175
Name
(RefSeq) transcription factor SOX-11-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119964817
Transcription factors [BR:
scau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119964817
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119964817
NCBI-ProteinID:
XP_038650775
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Position
1:87169644..87171425
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AA seq
343 aa
AA seq
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MVQQTKSSESKTSSKSCREAADSGISDMSAASSPNPGFSAHCGEAPWTSASVKAEEEASC
NPDWCKTPTGHIKRPMNAFMVWSQIERKKIMEQVPDMHNAEISKRLGKKWKMLKDNEKTP
FIREAERLRLKHMADYPDYKYRPRKKIRSESGAGAEEKSCRKEVKSFKKHSRPQKAKLHL
ERSKAKKAKIVRVAECADSQSESEPEPEPASPYNPDCNDSDGSCTDVSGYSSKDTRLPSP
DPKRSAQLTAAVSMSTRSIPGRPPEESDHELLLFDLSLNVAAGAELLELSAAGAGNLSLD
KDIDPLTSGSSPVSHFEFPDYGTPEVRKMISGDWLEIESNISY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaacagacaaagagttcggaaagtaaaaccagcagcaagagctgtagggaggcg
gcagatagcggcatcagtgatatgagcgcagcttccagccccaatccaggcttctccgct
cattgtggggaagctccctggaccagtgcctctgtcaaagccgaggaggaggcgagctgc
aacccagactggtgcaaaacccccaccggccacatcaaaaggcccatgaacgctttcatg
gtctggtcgcagatcgagaggaaaaagatcatggagcaagtccccgatatgcacaacgcc
gagatttccaagcgcctggggaagaagtggaaaatgctgaaggacaatgaaaagaccccg
ttcatcagagaggcggagcgcctgaggctgaagcatatggcagattatcccgattacaaa
tacagacccagaaagaaaatcaggtcggagtccggagcaggagccgaggagaaaagctgc
agaaaggaggtgaaatctttcaagaagcacagccgacctcagaaggcgaaactgcacctg
gagaggtccaaggcgaagaaagcgaagatagtgagagtggcggagtgtgcggactcgcag
tccgagtcggagccggagccagagccagccagtccttacaatccggattgcaatgacagt
gacggctcctgcacggatgtctcgggttattccagcaaggacaccaggctgccttccccc
gaccctaaacgaagcgcccagctgacggccgctgtctccatgtccacccgctcgatcccg
gggagacccccggaggaatctgaccatgaactcttacttttcgacttgagtttgaatgtg
gcggccggcgctgagctactggagctgagcgcggccggagcggggaacctatcactggac
aaggacattgacccactgaccagcggctccagccccgtctcccacttcgaattcccagat
tacggcaccccggaggtgcggaaaatgatctcaggagactggctggagattgaatccaac
atttcctattag
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