Scyliorhinus canicula (smaller spotted catshark): 119964898
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Entry
119964898 CDS
T11175
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00310
Lysine degradation
scau00514
Other types of O-glycan biosynthesis
scau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119964898
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119964898
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119964898
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119964898
Glycosyltransferases [BR:
scau01003
]
O-Glycan biosynthesis
O-linked Gal type
119964898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
119964898
NCBI-ProteinID:
XP_038650919
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All DBs
Position
4:108065356..108277840
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AA seq
345 aa
AA seq
DB search
MHICNRKYYGYLPVPLKAQQSLQEDIESFVHVLIERMIDHPPMEPSNNVSIPVRHADKMG
FDEIFMINLKRRTDRRQRMFRTLYEQNIDVKVVDAVDGKALNTSHLKALNIEMLPEYHDP
YSGRILTRGEIGCFLSHYYIWKEVIDRGLKKALVLEDDNRFQPHFRRRITKLMDDIEENQ
LDWDLIYVGRKRMQVDHPEKPVPGIMNLVEADYSYWTLAYLISQQGAKNLVAAEPLGKML
PVDEFLPIMYNKHPVEDYKIFYEPRDLTAFLVEPLLIYPTHYTGEPGYVSDTETSIIWDN
VDIRTDWNRKLSRKTKEQGEIGAEAQNTEALQPQSPIDTASRDEL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcacatatgcaacagaaaatactatggctaccttccagtgcccctaaaggcccagcaa
tccttgcaagaggatattgaaagctttgtccatgttcttattgaaagaatgattgaccat
ccccccatggaaccttccaataatgtttctatacccgtcagacatgcggacaagatggga
ttcgatgagatcttcatgataaacctcaagcgcaggacagacaggaggcaacgaatgttc
cgcacactttatgaacagaacattgacgtcaaagtggtagatgctgtagatgggaaagcc
ctcaacacaagtcatctgaaagccctcaacattgaaatgttaccggaatatcatgaccct
tactcaggaagaatactgacacggggagaaataggctgcttcctgagtcattattacatc
tggaaagaggtcattgaccgaggactaaagaaggccctcgtcttagaagatgacaatagg
tttcagccacattttcgaagaagaataacgaagctcatggacgatatcgaggagaaccag
ctggactgggacctaatctacgttggccggaagcggatgcaagtggaccatccggaaaag
cctgtgcctggcattatgaacctggtagaagcagattattcctactggacattggcctac
ctcatatctcagcaaggggccaaaaacctggtggcagctgaaccccttgggaagatgttg
ccagtggatgaatttctacccatcatgtacaataaacatccagtagaagattataagata
ttctacgaacctcgtgatttgacagcctttttggtggaaccactgctgatttaccctacg
cattacactggagaaccaggctacgtgagtgataccgaaacctctataatctgggacaat
gttgacatacgaacggactggaaccgcaagttatcgagaaaaacgaaggagcagggagag
atcggggcagaagctcagaatactgaggcactgcagccccaatcccccatcgacacagcc
tctcgagatgaattatga
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