Scyliorhinus canicula (smaller spotted catshark): 119964926
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Entry
119964926 CDS
T11175
Name
(RefSeq) neurogenic locus notch homolog protein 2-like isoform X1
KO
K20994
Notch 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119964926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
Notch
Ank
NOD
NODP
EGF_2
Ank_5
Ank_3
Ank_4
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
EGF_MSP1_1
cEGF
Glyoxalase_4
Motif
Other DBs
NCBI-GeneID:
119964926
NCBI-ProteinID:
XP_038651037
LinkDB
All DBs
Position
4:complement(120335758..120519068)
Genome browser
AA seq
2481 aa
AA seq
DB search
MGASRLWRNLWGVLGVVAVCGALQCHNSVQPCFASRGNCITHQNGTGECKCRTGFVGEYC
QHQDPCQISTCLNGGTCRVSIAGKIQRSCNCALGFTGERCETTVTNVCLNNPCQNRGSCR
LITLEKYECDCQQGWIGKNCQHVDSCASQPCANGGKCSSSRNNYTCSCASGYTGSRCEID
IDECSTGALCQNGGTCQNVPGSYHCLCKPGFTGTNCESVYVPCSPSACMNGGTCRPINND
LTYECNCLPGFSGKDCEINIDDCPEHNCQHGGTCVDGVNTYNCRCTPEWTGQFCTEDVDE
CQLQPNACQNGGTCSNNVGGYNCVCVNGWSGDDCSENIDDCAAATCMNGATCHDRVASFV
CECPIGKTGIFCQVDDACVTNPCHEGATCETNPLKNSFFCSCPLGYRGTICDEDINECSL
GGNPCEHGGKCVNTKGSFRCECAVGYTGPRCEMDINECLAMPCQNDATCLDQIGIFKCIC
MPGFAGTYCEMNIDECESQPCLNSGVCKDEVNRFACRCPDGFTGSMCQIDIDECASTPCQ
HGAKCIDRPNAFECECSEGFTGTNCETNENDCIPDPCHYGTCEDGIAGYTCNCTVGYKGP
ICSEQIDECQSQPCQNGGTCQDRVNNYKCRCPVGTSGINCEINHDDCASNPCDYGSCQDG
INRYDCVCSPGYTGPMCNVDIDECESNPCHNGGTCIDKINGFVCRCPEGYHDPHCISEVD
ECKSSPCIHGRCVDGVNSYQCVCEAGWAGLNCDVDKDECESNPCQHGGTCENLINGYKCT
CMKGFKGFDCQININECASNPCLNKGGCVDGVNAYYCTCSLPYTGKDCEFFLAPCSSHPC
ENGGACSETEDYENYMCSCAMNWQGQNCSVDINECVTDPCKNGATCQNTPGSYECRCLPG
YIGVNCETNVNDCRPNPCQNGGSCIDGVNTFSCSCLPGFTGSKCQQEINECFSSPCVNGG
NCSDYVNSYVCKCPRGFNGIHCENNMPDCTESSCFNDGTCVDGINSYTCLCRPGFTGSNC
QFDINECDSKPCQNGATCIDALGGYRCTCPSGYSGNNCQTLVNLCSGSPCKNRGKCLQRG
ATYRCNCQSGWTGLYCDVPDVSCEVAAHQRGLTVAQLCQHSGICINTGNSHQCQCMSGYT
GSYCQLDVDDCASNPCRNGATCRDYLGSYACECVPGYQGANCEYEVNECQVHHCQNGGKC
IDLVNDYKCSCPPGTGGVLCEINNDDCEPNINPHTGDHKCLNGGRCVDKIGGYSCICPPG
FIGERCEGDVNECLSNPCDREGSFDCVQLTNDYLCRCRPGFTGRHCESIVDLCLSRPCRN
GGTCMFAVNAPLGYTCQCRPGVVGASCEHTNYTCGQVLCQNGGICSMSPMGPRCNCLKGF
SGSVCELPICLTKQCHHGGTCLPKSSPPFFSCLCPAPFQGLTCDETEIKNCQLPLCKEKA
GDRVCDQECNNHECEWDGGDCSLTLKPWENCTESLQCWKYFNNNQCDPACNTPECLFDNF
DCRFTQKSCNPIYEKYCADHYQDGHCDQGCNNEQCGWDGLDCVDDAPEQLAKGTLVLIVL
LPPEELLNDAVNFLRRLGALLHTVLRFKKNSQGEPMITPYYGHGSRMKRFIRIVRELGQE
VIGSEVYLEIDNRQCLQTSEDCFPSTESAAAFIAAQSSKGNLPYPIKYVKSEPDDRNPPA
QLSLLYLLMVAVGIIILILILGVVAAKRKRKLGPLWFPEGFILKKGGNRKRREPVGQDAV
GMKNLSKPVPDDSMIDDNQNEQWMEGGGPEAKKPKTEDQALLSENEDQVDHRPWTQQHLV
AADIRSTPSLALTPPQGEQDADCMNVNVRGPDGFTPLMLASLRGGGLDTGIEEEEDTDDS
SANVITDLIYQGASLHSQTDRTGETSLHLAARYARADAAKRLLDAGADANAQDNMGRSPL
HAAVAADAQGVFQILIRNRATDLDCRMNDGTTPLILAARLAVEGMVVELINCHADVNAVD
DHGKSALHWAAAVNNVDATHALLKNGANKDMQDNKEETPLFLAAREGSFEAAKILLDHFS
NRDITDHMDRLPRDIAQERMHHDIVQLLDEYNLVRSPQGPGGPMMGPTVSPVTCPGGNSF
VNLKMTPMGKKARRPSTKSLTPGNTKDSKEAKARRRKRSIGNDKASLVESSLALSPVDSL
ESPHTYLSTTSPPLLTSSGVLHQSPPASLHPSTPVQSQLAMSFSNLSTMKSMNMDSNTIL
SQVLPSMSHPSMVGQSTSLGMPLGRVEHVNMQSEWMNRVGITTSQYNPMLGILHQVASSY
PNMHQQNAVLQANMPPVHMAMLREQLPQILTYQPMNSGASQSVITQQQNSQRAQQQGQPY
CGSMTPVPVGNMHQMPEIVQLPNGQLNNSMLSTTQEGQGSQTTLPPYHKLQNSMQLDKYP
TPPSQHSYVSATDNTPNHNVHLQSEHPYLTPSPESPDQWSSSSPHSTSDWSDITPSPAPI
GQRPQVSHIPEQQRNNMQVFA
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atgggagccagccgtttgtggaggaatctgtggggcgtcctgggtgtagttgctgtgtgt
ggagcattacagtgccataactccgttcagccatgttttgcttctagaggaaattgtata
actcatcagaacggtacaggcgaatgcaagtgtcgaacaggatttgtaggtgaatattgc
cagcaccaggacccctgccagatttcaacctgccttaatggaggaacatgtagagtctca
atcgcaggaaaaatacagaggtcgtgcaactgtgctttggggtttacgggtgagcgttgt
gagacgactgtcaccaatgtctgtttgaacaatccctgccaaaatcgaggatcctgccgt
ctcattacccttgagaaatatgagtgtgactgtcagcaaggatggataggtaaaaactgc
cagcatgtggattcctgtgcctcacagccatgtgctaatggcggaaaatgtagcagttca
agaaacaactacacctgtagctgtgcttcaggttataccggatcccgctgtgagatcgac
attgatgagtgcagcacaggggctctgtgccagaatggaggaacgtgccaaaatgtgcca
ggatcatatcactgcctgtgtaaaccagggttcactgggaccaactgcgagagtgtttat
gtcccctgttcaccatcggcatgcatgaatgggggcacctgccgaccaatcaacaatgac
ttgacctacgaatgcaactgtctaccaggattcagtgggaaggactgtgagataaacatt
gatgattgccctgagcataactgccagcatggaggcacctgtgtggatggagtgaacacc
tacaattgccgatgcacacctgaatggacaggccagttttgtacagaagatgtggacgag
tgtcaactgcagccaaatgcatgtcagaatggagggacctgttccaacaacgtcggaggg
tataactgcgtctgtgtcaatggctggagtggcgatgactgcagtgagaatattgatgac
tgtgctgctgcaacctgcatgaatggggccacttgccatgaccgcgtggcatcttttgtt
tgtgaatgccctattggcaagactgggatcttctgtcaagtggatgacgcatgtgttact
aacccctgtcatgaaggagccacatgtgaaaccaatcccctcaagaacagcttcttttgc
agttgtccccttggatacagggggactatctgtgatgaggacatcaatgaatgctcactc
ggaggcaatccctgtgaacatggaggaaaatgtgtaaacaccaaagggtccttccgctgt
gagtgtgctgtgggttacacaggaccacgctgtgagatggacatcaatgagtgccttgcc
atgccctgccagaacgatgccacctgcttggaccagattggaatattcaaatgcatctgt
atgccaggttttgcggggacatattgcgaaatgaatatcgatgaatgtgaaagccagcca
tgcctaaacagcggagtgtgtaaggatgaggtgaacagatttgcatgcaggtgcccggat
ggttttaccgggagtatgtgccagattgacattgatgagtgtgccagcacaccatgccag
catggagccaagtgtattgatcgtccgaatgcctttgaatgcgaatgcagcgaaggcttt
acggggactaattgtgagactaacgaaaatgactgcatcccagacccctgccactatgga
acgtgtgaggatggaatagccgggtatacctgcaactgcacagttggctacaagggtcca
atctgcagcgagcagattgacgaatgccagagtcagccctgccagaatggaggcacttgt
caggaccgtgtgaacaattacaaatgccgctgtccagttggaacctcaggtatcaattgt
gagattaaccacgatgactgtgcaagcaatccttgtgactatggaagctgccaagatggt
atcaatcggtacgactgtgtctgcagtcctggctatacaggtcccatgtgcaacgtcgac
attgatgaatgtgagtccaatccgtgccacaatggcggcacatgcattgataaaatcaac
ggctttgtgtgccgctgccctgagggctatcacgatccccactgtatatcagaagtggat
gagtgcaagagcagcccttgtattcatggcagatgtgtggacggcgtaaacagttaccag
tgtgtatgtgaagctggttgggcaggactaaactgcgatgtggacaaagacgagtgcgag
tcgaacccttgtcagcacgggggaacctgtgagaacctaatcaatggctacaagtgcaca
tgcatgaagggatttaaaggtttcgactgtcaaatcaacataaatgaatgtgcgtcaaac
ccctgtctgaacaaaggaggctgcgttgatggagtgaatgcctactactgcacctgctcc
ctcccatatactggcaaggattgtgagttttttcttgctccgtgttcctcccatccgtgt
gaaaatggaggcgcatgcagtgaaactgaggactatgagaattacatgtgctcctgcgca
atgaattggcaaggtcagaattgctcggtggacattaatgaatgtgttactgacccgtgt
aaaaatggtgctacttgtcaaaatacacccgggagctatgagtgtcggtgcctccctggc
tacattggagtgaactgtgagacaaacgtcaatgactgcagacccaatccatgccaaaac
ggaggctcctgtatagatggtgtcaacacgttctcatgcagctgcttgccggggttcact
ggtagcaaatgccagcaagagataaacgagtgcttcagtagcccatgtgtgaatggcggg
aactgctccgattatgtcaacagttatgtctgcaagtgcccgcgaggcttcaatgggatt
cactgtgaaaacaatatgcctgactgcacagagagttcctgcttcaatgatggaacctgc
gtcgatggtatcaactcgtatacctgcctctgccggcctggcttcaccggttccaactgc
cagttcgacatcaatgagtgtgactccaaaccatgtcaaaacggagccacctgcatcgat
gcgttgggcggttatcgctgcacatgcccctctggatactcgggtaacaactgtcagact
ttggtgaatctgtgtagtggttcgccctgtaaaaacagaggcaagtgcctgcagcggggt
gccacatatcgctgcaattgccagagtggatggacaggactgtactgcgatgtgccagat
gtgtcatgtgaggtggccgctcatcagagaggcttgactgtcgcacaactgtgtcagcat
tcagggatatgcatcaacactggcaatagtcatcagtgccagtgcatgtccgggtacacg
ggcagctattgccagctggatgtggatgattgtgcttcgaacccatgccgtaatggagcc
acctgcagagactacctgggcagttatgcatgcgagtgtgttccagggtaccaaggagcc
aactgtgagtatgaggtgaatgaatgccaagtccatcactgtcagaatggaggaaaatgc
atcgacctggtgaatgattacaagtgttcctgtccaccaggaactggaggtgttctgtgt
gaaataaacaacgatgattgtgagcccaatattaatccccacacgggagaccacaaatgt
ctaaatggcggacggtgtgttgacaaaatcggtggctacagctgcatttgcccacctggc
tttattggagagcgctgtgaaggagatgtcaacgagtgtctttccaatccatgcgatcgc
gagggaagctttgactgcgtgcagttaaccaatgattacctgtgcaggtgccgacctggt
ttcacaggccgtcactgtgagagcattgttgatctgtgcctttcacggccatgtcggaac
ggagggacatgtatgtttgctgttaacgctccgctcggatatacttgccaatgcagacct
ggcgtagtcggagcgagttgtgaacacaccaactacacctgtgggcaggtattgtgccag
aacggtgggatttgctccatgagtcccatgggccccaggtgcaattgtttgaaaggattc
agcggctcagtgtgtgagctacccatctgccttaccaagcagtgccaccatggcggcacc
tgcctcccaaagtcttcgccaccattcttcagctgcctgtgcccagctccattccagggg
ctgacgtgtgatgaaacagagatcaagaactgccagttgcccctgtgcaaggagaaggct
ggggaccgagtctgtgaccaggagtgcaacaaccacgagtgcgagtgggacggtggtgac
tgctcgctcaccttgaaaccttgggagaactgcacagagagcctgcaatgctggaaatac
ttcaacaataaccaatgcgaccccgcctgcaacacacccgagtgcttgtttgacaacttc
gactgtcggttcactcagaaatcctgcaacccaatttatgaaaagtactgtgctgaccac
taccaagatggtcactgtgaccagggttgtaacaacgagcagtgtggttgggacggccta
gattgtgtagatgacgcccctgagcaactggcaaaggggacgctggtgctgatcgtgctc
ctgcctccagaggaactgctcaacgatgccgtgaacttccttcgaaggctgggggccctc
ctgcacactgtcctgagattcaagaagaactcacaaggggagcctatgatcaccccttac
tacggccatggctccagaatgaagagatttattcggatagtgagagagcttgggcaagag
gttataggttccgaagtctacttggagatagacaaccgtcagtgtttgcaaacatctgag
gattgtttcccgtcaacagagagtgcagccgccttcattgctgcccagtccagcaagggc
aacctgccctacccaatcaaatatgttaaaagtgaacccgatgatcgaaatcccccggca
cagctgagcctcctgtacctattgatggttgccgtagggatcatcatccttattctgatc
ctgggggtcgtagcggccaaacgcaaacgcaagcttggcccactgtggttcccagagggc
ttcatcctgaagaagggtggcaatcggaagcgtcgcgaacctgtggggcaggatgcagtg
ggaatgaaaaatctgtcaaagccggtgcctgatgacagcatgattgatgacaaccaaaat
gagcagtggatggagggaggagggccagaggcaaagaaacctaagactgaagatcaggct
ctactttcagaaaatgaagaccaggttgaccatcgaccatggacacagcagcacctagtg
gcagcagacatccgttcaacaccatccctggcactgaccccacctcaaggggagcaggat
gccgactgcatgaacgtcaacgtgagaggtccagatggttttacacctcttatgttggca
tcactacgaggtggtgggctggacactggaatcgaggaggaggaagacaccgacgactcg
tcagccaatgtcattactgacctcatctatcaaggtgccagcctccattcccagacagac
cgcacaggagagacatctctccacctggctgcacgatacgcccgggctgatgcagccaaa
cgtctccttgatgcaggtgccgatgccaacgcccaagacaacatgggtcgatcgcctctc
cacgcagctgtggcagctgatgctcagggggtgttccagattctgatcagaaatcgggcc
actgacctggattgccgaatgaacgatggtaccacaccactgatcctggctgcccgcctt
gctgttgaagggatggtggttgaactgattaactgccatgcagatgttaacgctgtggat
gatcatggaaaatcagcgcttcattgggcagctgccgttaacaatgtagatgcaacccac
gccctactgaagaatggagccaacaaggacatgcaggacaacaaggaggaaacacccttg
tttcttgccgcccgggaaggcagttttgaagctgccaaaatcctactggaccacttttct
aaccgtgacatcactgaccatatggaccgactcccccgggacatcgcgcaggagcggatg
caccatgacatcgttcaactgctggatgagtacaacctggtccggagcccgcaggggcca
ggcggacccatgatggggcccactgtgtctccagtgacttgcccaggtggcaactccttt
gtgaaccttaaaatgacccccatgggcaagaaagcaagacggccgagcacaaagagcctc
actccaggcaatactaaagactccaaggaagccaaagccaggcggcgaaaaagatccatt
ggcaatgataaagcgtctcttgtggagagctcgctggctctttcaccagtcgattctctg
gaatctccacatacctacttgtccaccacatcgccgcctctactgacgtcatcaggggtt
ttacaccaatctccaccagcatctctccacccatccaccccagtgcaaagccagctggca
atgtccttctcaaacctcagtacaatgaaaagtatgaacatggactccaacacaattctg
agtcaggtcctcccctccatgtcccatccttccatggttgggcaaagcaccagcctgggg
atgcccttgggaagggttgagcatgtgaacatgcagtcagagtggatgaaccgagtggga
atcaccacctcccaatacaacccaatgctaggcatcctgcaccaagttgctagttcctac
cctaatatgcatcaacagaatgcagtgcttcaggctaacatgcctccagtgcacatggcc
atgctcagggagcagttaccacagatactgacctaccaacccatgaacagtggtgcatcg
cagtcggtgataacgcagcagcagaactctcaaagagcgcagcaacaagggcagccttac
tgtggttcaatgacaccagtgcccgtcggcaacatgcaccagatgcctgagatcgtccag
ttgccaaatggccaactgaacaattccatgttgtccacaacccaagagggtcaggggtca
cagaccactctgccgccttaccataagctgcaaaactccatgcagctcgataagtacccc
accccaccgtctcagcacagctatgtttcggcgacagacaacaccccgaaccacaatgtt
catctccagagtgagcacccgtacctcacaccctcccccgagtctcccgatcaatggtcc
agctcctctccgcattccacgtcagattggtcggacatcacgcctagtcctgctccaatc
ggtcagcggccacaggtttcacacattccagagcagcagaggaacaacatgcaggtcttt
gcctga
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integrated database retrieval system
