Scyliorhinus canicula (smaller spotted catshark): 119965038
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Entry
119965038 CDS
T11175
Symbol
lman2
Name
(RefSeq) vesicular integral-membrane protein VIP36
KO
K10082
lectin, mannose-binding 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119965038 (lman2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119965038 (lman2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
scau04091
]
119965038 (lman2)
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
119965038 (lman2)
Lectins [BR:
scau04091
]
L-type lectins
119965038 (lman2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Lectin_L-type_dom
Motif
Other DBs
NCBI-GeneID:
119965038
NCBI-ProteinID:
XP_038651182
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Position
4:138729310..138811422
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AA seq
355 aa
AA seq
DB search
MATGVSVWGSGRRSCSQWREQALTLGSWALLLIPCLCLGPAAGDMTDGNSEHLKREHSLM
KPYQGVGSSSMPLWDFGGSTMLTGHYIRLTPDERSKVGSIWNRVPCYLKDWELHVQFKVH
GSGKKNLHGDGLAIWYTKDRLSPGTVFGSKDKFHGLGMFIDTYPNDESADRVFPYVSAMV
NNGTLPYDHSKDGRNSELSGCPAEIRNVDHDTYLAIRYSRGRLTVMTDVEDKNEWKECID
ISGVRLPTGYFFGASAATGDLSDNHDVISMKLYQLTVEHSPEDENIDWTKIEPSVSFLKS
PKDNIDDPTGNFRSGPLTGWKVFLLLLCALLGIVVCGMVGAVVFQKRQERNKRFY
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggtgtatctgtctggggcagcgggaggaggagctgttcccaatggagagag
caggccctaacactcggcagctgggcgctgcttctcatcccctgcctatgcctgggaccg
gccgcaggtgacatgacggacggcaacagcgagcacctgaaacgggagcacagtctgatg
aagccctatcagggagtgggctcgagttctatgccgctatgggattttggtgggagcacc
atgttgacaggtcattacatccgcctaacacctgatgagcgcagtaaagtaggatcaatc
tggaaccgagttccatgctacctgaaagactgggagctccacgtccagttcaaagtccat
gggagtggaaaaaagaatcttcatggtgacgggttagctatctggtacacaaaggatcgt
ttaagccctggtaccgtgtttggaagcaaagataagttccacggcttaggaatgttcata
gacacgtacccaaatgatgagagtgctgatcgggtgtttccatacgtctcagcaatggtc
aacaatgggactctgccgtatgaccacagcaaagatggacgcaactctgagctttctgga
tgccctgcagaaatccgaaatgtagatcacgacacatatttggcaattcgttactctcgg
ggaaggttaacggtgatgacggacgttgaagacaagaacgagtggaaagagtgcattgac
atcagcggggtccgactgcccactggttacttcttcggtgcgtcagcggcaactggagac
ctgtcagacaaccatgatgttatctccatgaaactttaccaactgacagtggaacactca
ccagaggacgagaatattgattggacgaaaattgagcccagcgtcagtttcctgaaatct
cctaaagataacatcgacgatccaacgggaaattttcggagcgggccactgacaggctgg
aaggtcttcttgctgctcctctgtgcattgctcgggatcgttgtgtgcggcatggtggga
gctgttgtcttccagaagcgccaagaacgcaataagcggttttactga
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