Scyliorhinus canicula (smaller spotted catshark): 119965092
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Entry
119965092 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: matrin-3-like
KO
K13213
matrin 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119965092
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119965092
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
119965092
NCBI-ProteinID:
XP_038651303
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All DBs
Position
4:complement(152921683..153064080)
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AA seq
945 aa
AA seq
DB search
MASFGRGQSNQMRTKRKSRFHDADAGGLAAGPPLNIQAALGTLCQNPHLAGLINSGQGQN
YGLHAAGQGQNFGLQGAGPGQNFGPQGMGPGQNFGPQGVGQRSKGLMSSAGGPSRYSDAA
SSSLPSLFGVRNQNQQSHAVQKQIDADRASNILAAFGLSSRDLDELSHYPEDKLTPESLP
EILTEIKRRRANEGAASKYSRGDGSLRHDRSYRTSHDDWEEERHFRKRNYGSRDSSLDSV
VEYSHGHSSRESTSRYDRKDYERERLRGTDDFSREEMHLSDPSHNFNKFDSDYGRAARLP
SPRTHERSLFERKRGSPSLNNINDYHGFLPAVFPYLCSLCDLNIHSVQEWNQHKNSTTHI
RLCDLLVEIYPEWNPDAFPPQMADPLVLQSTNLAPGILGPPPSGSFLPSSRGMESHGAPN
RKGPMDNQQGNSIQRLKKPLRMNLNDEPGRVVHISELQRGKCMNRDLIKLAEPFGQVTNC
LLIKSKGEGFVELAYPEAAQAMVKFYQMKPTFVDGNVIRAELSQKYKKLTIKGKEGEVRS
RVVHISNLPSVGYTDSEVVCLGIPFGKVTNYLLMRVKNQVFLEMETHQLAMSMIEKFKKI
PLMFHGRELKVYLSQKYRNLVLRKQGKGVDELLRNRERETRKRGRSHSPSIRARSPSIKR
KAQDKSKNSMETXLESTQVGSPSLEENKNSKQMEGENTAKIKSQGSPSPDTENDEEDGAE
DFLLASDESVKAKSETGDREDDMEMELEPDMEVGHFNKSETKEADDTEPGSQISAQLSGK
KSEGIRCPEYMGEFFALDKVDDPQGILAQKIKSVQTDKMDDVSKGDQDCERHSYNLRNNV
DENTEIMENSSTTCGEPSSEQIQALSPLPDEYKLGPYKPNNPVGLNYVVPKTGYYCKLCC
LFYTSEETAKQTHCGTVDHYQRLKKTLAKQAMDYWREKKQQIIQE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttttggcagaggccagagcaatcagatgcgtactaagaggaagagtcgtttt
catgatgcagatgccggaggtcttgctgcaggtccacctctgaatatccaagcagctctt
gggacattgtgccagaatccacacttggctggcctaataaactctggacagggtcagaat
tatggccttcatgctgcaggacagggtcagaactttggcttacaaggtgcaggaccgggt
cagaactttggcccgcaaggtatgggaccaggtcagaactttggcccgcaaggtgtggga
cagagatctaaaggtttgatgtcttcagctggtgggccctcacgatacagcgatgctgct
agcagtagcttgccttccttgtttggagttagaaatcagaatcaacaatctcatgctgtt
cagaaacagattgatgcagacagggccagtaatattctagctgcatttggtctttcatcc
agggatttggatgaactgagccactaccctgaagataagcttacacctgaatccttgcca
gaaattcttacggagataaagaggagacgagctaatgaaggagcagcttcaaagtacagc
agaggtgatggttctctacgacatgaccgttcctacagaacctcccatgatgactgggag
gaagaaagacactttaggaaacgtaattatggaagtcgtgactccagtcttgactcagtg
gttgaatatagccacggtcattcttctcgagagtcaacttctagatatgacagaaaggac
tatgaacgtgaacgattaagaggcaccgatgatttctccagagaggaaatgcatctctct
gacccctcacacaatttcaataaatttgattctgattatggaagagctgctcgtcttcct
tctcctcgtacacatgaaaggtctctctttgagagaaaacgaggatctccttcgttgaac
aacataaacgattaccatggtttcttgccagcagtgttcccctatttgtgctcgctgtgt
gatctaaacattcattctgtacaggagtggaaccagcacaaaaatagtacaacacacata
cgtctttgtgacctccttgtggaaatatatccagaatggaacccagacgccttcccaccc
caaatggccgatccactggttttacagtcaacaaacctggctccaggcattctgggcccc
ccaccatctggatccttccttccatccagcagaggaatggaatcccatggggcaccaaat
cgcaaaggcccgatggataaccagcaagggaacagcattcagaggctaaagaagccactc
agaatgaatttgaatgatgagcctggtcgagtggttcacattagcgagttgcagcgaggg
aaatgtatgaatcgggacctgatcaagctggctgaaccttttggacaggtgacaaactgc
ttgctgataaagtcaaagggtgagggatttgtggaattggcttatcctgaagcggctcaa
gccatggtgaagttttaccagatgaaacctaccttcgttgatggcaatgtcatcagagca
gaactctctcagaaatataaaaagttgactataaagggcaaagaaggtgaagtacgcagc
cgggtggtccacatcagcaatttaccttctgttggctacactgattcagaagttgtatgc
cttggcattccctttggaaaagtgaccaactatctactgatgagagttaagaatcaggtt
ttcctggaaatggaaacacatcaactggcaatgtccatgattgaaaagttcaagaaaata
cctctaatgttccatggcagagagctgaaagtatatttgtctcaaaaatacagaaaccta
gtattgaggaaacaaggtaaaggagttgatgagctgttaagaaaccgagaacgagaaacc
cggaaaaggggtcgttcgcacagtccttctataagagcacgatcgcccagcattaagaga
aaggctcaagataaatccaagaattcaatggaaacgngccttgaaagtacgcaggtgggc
tctccttcactagaggaaaacaaaaattccaaacagatggaaggagaaaatactgcaaaa
ataaagtcacaaggtagcccttccccagacactgaaaatgacgaagaagatggagcagaa
gacttcctgttggcatctgatgaatcagtgaaggccaagtctgaaactggtgaccgagag
gacgatatggagatggaattggaaccagatatggaagttgggcacttcaacaaaagtgaa
actaaggaagctgatgatacagagccgggttctcaaatctcagcacaactttcaggaaag
aaatcagaaggcatacggtgtccagaatatatgggtgagttttttgccctcgataaggtt
gatgatcctcagggtatcctggctcagaaaataaaatctgtccaaacagacaaaatggat
gatgtcagcaaaggtgatcaagattgtgaaaggcacagctataatctaagaaacaatgtg
gatgaaaacactgaaataatggaaaacagttccacaacatgtggagaaccatcaagtgaa
cagatccaggcactctctcctcttccagatgaatacaagcttgggccatataaacccaac
aatcctgtaggattaaattatgtggttccaaaaactggctactattgcaaactctgctgt
ctcttctacacaagtgaggagacagcaaaacagactcactgtggcaccgttgatcattat
cagagacttaagaaaactctggccaagcaagctatggactactggagagaaaagaagcag
caaatcattcaggagtaa
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