Scyliorhinus canicula (smaller spotted catshark): 119965205
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Entry
119965205 CDS
T11175
Name
(RefSeq) glutamate receptor ionotropic, delta-2-like
KO
K05207
glutamate receptor delta-2 subunit
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119965205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119965205
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119965205
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119965205
NCBI-ProteinID:
XP_038651572
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All DBs
Position
4:complement(182004385..182595546)
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AA seq
982 aa
AA seq
DB search
MEVFAALIASISWILCTDTVASDSIIHIGAIFEETARKDDKMFRLAVAEMNMNEEILQNE
KITFSVRFVDSNNPFQAVQEACDLVSQGILALVSSTSCAPSASLQSFADGMNIPHLYIQR
TPAGTPRSQCSIARNARNSDYTLSLRPPDYFNEVILKVITEFSWQKFMIFYDDAYDIRGI
QEFLSQAGQQGIEVSLQKVEASISSMFTGLFSTLGFDELSRFRDMLRRALLFLNPRTAKT
FISEAVDTNLAAVDSHWIFINEEINDADIRELAKRLTGRLTVIRQIFPMSESKSQYCLRN
THRFSSVMCNPKDPFTQHMEISNLYVYDSVLLLADAFHKKLEDRKWHSMASLTCIRKNSK
PWQGGKSTFDAIKKGKVSGLTGMLNFRDDGTNANVLFEILGTSYSEEKDRGIQRLGLWNP
TTGLNGSLIDQKLENSMEGVTLRVVTVLVPPFVMVSENIFGQPKEFCGFSIDVLHALSEH
LGFKYQIYQTSDNQYGKLQNNGKWNGMIGELVNKRADIAVSALTITPERENVVDFTGRIM
DYTLGFLLKKPEQRVDMFTCLEPFDLTVWACIIGTLFIIGLLVCMFSWVKPSPLQIGSVT
STTLYNAAWLVYGSFVQQGTGGEVPINTLAVRLLMGFWWLFVFIIISTYTANLTAILTNN
RIENPIRSFQDLAKQTDVPYGTVLDSEVLQIIKTKGRNPFEIEQTYAHLWNMINKTNGLE
NCVKRIHDGIQRVKSGNYAFIWDVAALEYIVENEPDCTLVTARNSKVDRGYGIALQDGSP
YRDIFSHRLLELEQSGDLDALKQKWWPKVGKCDLQSHVKTHGKGGPMDLQNFAGAFGFLA
LGVILAFIAAMVETWWKGEKKTDSHQEEDNEIEIDQIQKQTDDLSKVEESSLKFSPSFVD
LNSFELSMMPAGDNQDQYSDFRNTHLTMSTFIPDQIRRTSTCSLSAKTSAGLPLSGTATH
QPAQYVCTPRNERDCSSPSSFL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggaagttttcgctgctctcattgcgtccatctcttggatcttatgtaccgacactgta
gctagtgattccatcattcacataggtgcaatttttgaggagactgccagaaaggatgac
aaaatgtttcgattagctgtggctgaaatgaacatgaatgaagaaatattgcaaaatgaa
aagataactttctctgtccgatttgttgattccaacaatccatttcaagctgtccaagag
gcctgtgaccttgtgtcacaagggattttggctcttgttagctccactagctgtgcacca
tcagcttcactgcagtcctttgcagatggaatgaatattcctcacctctacattcagcgc
acaccagctggaactccacgttctcagtgttctatagcaaggaatgctcgaaacagtgat
tacacgctttctctccgtcctcctgattacttcaatgaagtcattcttaaagtaatcaca
gaattttcctggcagaagttcatgatcttctacgatgatgcatatgatattcgtgggatt
caagaatttttgagccaagctggtcaacagggaatagaggtttcactccaaaaggttgag
gccagcataagcagcatgttcacgggccttttctccactcttgggttcgatgagctgagc
cgtttccgagacatgcttcgaagagccttacttttccttaatccacgtacagcaaagacc
ttcattagtgaggcagttgacaccaatctggcagctgttgatagtcactggatcttcata
aatgaggaaataaatgatgcagatattcgggagctcgcaaagagattgactggcaggttg
actgtcattcggcaaattttcccaatgtcagaaagcaagagccagtactgtttgagaaac
actcaccgattttcttctgtgatgtgcaatcctaaagatcccttcacacagcatatggag
atctccaatctctatgtatatgacagtgtgttgctgctggctgatgccttccataaaaaa
ctggaagatcgaaaatggcacagcatggctagtctgacttgtataagaaaaaattctaaa
ccatggcaaggtgggaagtctacatttgatgcaatcaaaaagggaaaagtgagtggatta
acgggaatgctcaattttagggatgatggtacaaatgccaatgttctgtttgaaattctt
ggtaccagttacagtgaggaaaaggatagagggattcaacgtctaggactttggaatcca
accactggattgaatggttccctcatagatcaaaaactggaaaatagtatggaaggagtg
acgctgcgagttgtgacagtcctggttcctccatttgttatggtgtcagagaacatattt
ggtcaacccaaagaattttgtggtttttctatagatgttctgcatgccttgtcagagcat
cttggcttcaaataccaaatttatcaaacttctgataatcaatatggtaaattacaaaat
aatggaaaatggaatggaatgataggagaacttgtgaacaaaagagctgatatagcggtt
tcagccttgacaattactccagagagagagaatgttgtggacttcactggtcggatcatg
gactacaccttaggatttctacttaagaagccagaacagagagtggacatgtttacctgc
ctagaaccatttgatctgacagtatgggcatgtattattggtactctgtttataataggc
ctgcttgtctgtatgtttagctgggtaaagccatcgccacttcaaataggatctgtgaca
tcgacaactttgtacaatgctgcgtggctggtttatggatcatttgtacaacaaggaaca
ggcggagaagttcccattaacactttggcagttcgcttgttgatggggttttggtggctt
tttgtgtttataatcatctcaacatacactgcaaacctaactgctatcttgaccaacaat
cgaattgaaaaccctattcgatcttttcaggacctggccaagcaaacagatgttccatat
ggaacggtccttgattcagaagtattgcaaataatcaaaaccaagggtcgaaatccattt
gagattgaacaaacatacgctcatttgtggaatatgataaacaaaacaaatggtttggag
aactgtgtgaagagaattcatgatggaatccaaagggtaaagtctggaaactatgcattc
atctgggatgttgcagcattggaatatattgtggagaatgaacctgactgcacccttgtc
acagcaaggaattctaaagtcgatcgagggtatggtattgctcttcaagatggcagtccg
tacagggatattttttctcacaggcttcttgaacttgaacaaagtggtgatctggatgcg
ctaaagcagaagtggtggcccaaggttgggaaatgcgatttgcaaagtcatgttaaaaca
catggaaaaggaggccctatggatctacaaaacttcgctggagcatttggttttcttgct
ttgggtgtaattttggcttttattgctgccatggtagaaacttggtggaaaggcgaaaag
aaaacagactctcatcaagaggaggacaatgaaattgaaattgatcagatccagaaacag
acagatgacctctctaaagtcgaggagagttctcttaaattttcaccatcgtttgtagac
ttaaattcttttgaactatcaatgatgccagctggtgacaatcaggatcaatatagtgat
ttcaggaacactcatttgaccatgtcaaccttcatacctgaccagatacggaggacaagc
acatgtagcttatcagctaagacttctgcaggattgccactgagtggcacagctactcat
cagcctgcacaatatgtatgcacaccacgaaatgagagagattgcagcagtccttcttct
ttcctctga
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