KEGG   Scyliorhinus canicula (smaller spotted catshark): 119965272
Entry
119965272         CDS       T11175                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A0-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119965272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scau03019]
    119965272
   03041 Spliceosome [BR:scau03041]
    119965272
Messenger RNA biogenesis [BR:scau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     119965272
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119965272
Spliceosome [BR:scau03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    119965272
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 119965272
NCBI-ProteinID: XP_038651718
LinkDB
Position
4:192616313..192617552
AA seq 327 aa
MAREQLCKLFVGGLSFETVEGNLRNHFEEWGKLTDCVVVQDTITRRPRGFGFVTYSSPSE
ADAAMAARPHVLDGRTVDLKRAVPREDSNKPGFNMKVKKIFVGGIKENLGEDDLQSYFSD
YGMIEKVDVICDRETGKKRGFAFVYFDDHDSVDKAVIQKYHMINGYRCEVKKGLSKEEMQ
SGTRPRGRAGTFSQRNGRSNGNFGNAAGYGAQGGGGGGGYYSDRGSRGDVYGGYGDGGYP
RRDRSFSGGSYDRIRDYGFANYGGGERGYNNENYDDVYDNFGSYSPEQSSYGPMRGGGGM
EKYAGPYRGDYGASNRNRNRDYGGYAF
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcgagggaacagctctgtaagctatttgttggcgggctcagcttcgagacggtggaa
ggcaacttgcggaaccattttgaggagtggggcaagctgaccgactgcgttgtcgtgcaa
gataccatcacccggcgcccccgcggcttcggctttgtcacgtactcttcgccgagcgag
gcggatgctgccatggctgctaggcctcatgtcttagatggccgcacggtggatctcaaa
cgagctgtgccaagggaagactccaacaaacctggcttcaacatgaaggtaaagaagatc
tttgttggcggtattaaagagaaccttggcgaggatgatttacaaagctacttctcagac
tatggtatgattgagaaagtagatgtgatctgtgaccgagagactggcaagaaaagaggc
tttgcctttgtgtacttcgatgaccatgattctgttgataaagcggttatacagaagtac
cacatgattaatggctaccggtgtgaagtcaagaaaggtttgtcgaaggaggagatgcag
agcggaactagacctcgcggccgagctggcacctttagccagagaaacggccggagtaat
ggcaattttggaaatgcggctgggtacggggcccagggcggcggaggcggaggcggctac
tacagcgatagaggaagccggggagacgtctacggcggttacggtgatgggggttatcct
cggcgtgatcgttccttctcgggcggaagttatgatcgaattcgggattatgggtttgcg
aactatggcggcggcgagagaggatacaataatgaaaattacgacgacgtgtatgacaat
ttcgggagctattcccctgagcagtccagctatggccccatgagaggagggggtggtatg
gaaaagtatgctggaccctacaggggagattatggtgctagcaatagaaaccgaaacaga
gattatggaggatatgccttttaa

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