Scyliorhinus canicula (smaller spotted catshark): 119965327
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Entry
119965327 CDS
T11175
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00061
Fatty acid biosynthesis
scau00071
Fatty acid degradation
scau01100
Metabolic pathways
scau01212
Fatty acid metabolism
scau03320
PPAR signaling pathway
scau04146
Peroxisome
scau04216
Ferroptosis
scau04920
Adipocytokine signaling pathway
Module
scau_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
119965327
00071 Fatty acid degradation
119965327
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119965327
09143 Cell growth and death
04216 Ferroptosis
119965327
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119965327
03320 PPAR signaling pathway
119965327
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scau01004
]
119965327
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119965327
Enzymes [BR:
scau01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
119965327
Lipid biosynthesis proteins [BR:
scau01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
119965327
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of breast milk
119965327
Exosomal proteins of breast cancer cells
119965327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
119965327
NCBI-ProteinID:
XP_038651866
LinkDB
All DBs
Position
4:complement(204892444..205143469)
Genome browser
AA seq
747 aa
AA seq
DB search
MRKEPLSWPGRYKTIPVRMAKWGLQAKVRTQRTLRHSSNLQFFSSLIEKMQAKEVLRNLR
LLELDEFSQFFHTIPPPTLVGIASFAAIVAYWLTTRPKALKPPCDLSQQSVEIEGADQAR
GSVLGDSLQLMTHYHDDAKTMYEVYQRGLYITGDGPCLGFRKPKHPYQWLSYKQVATRAE
DLGSGLLKKNCRSSPDQFIGVFAQNRPEWIIAELACYTYSMVIVPLYDTLGPEAIRYIIN
TAEISTVICDKVEKAKILLKNVEKKETPGLKIVILMDPFEMDLVEMGNDCGVQILALQEV
ENLGRVNRQTPVPPRPEDLSIVCFTSGTTGNPKGAMLTHGNVVADFSGFLKVTESQWLPT
SDDVHISYLPLAHMFERMVQSVVICHGGRIGFFQGDIRLLSDDMKALHPTIFPVVPRLLN
RMYDKIFSQAGTPVKRWLLEFAARRKAIEVRNGIIRNDSVWDKLFFKKIQDSLGGKVRMI
VTGAAPASPAVLGFLRAALGCQVYEGYGQTECTAGCTFTTPGDWTSGHVGAPLPCNYLKL
IDVDEMKYFSAKGEGEICVKGPNVFKGYLKDTEKTAEALDKDGWLHTGDIGKWLPNGTLK
IIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVAQVYVHGDSLQSFLVGIVVPDPEATEAW
ARKRGFESSYAELCKSEGYKKAIMEDLVKLGQQAGLYSFEQIKAIYLHYEMFSVQNGLLT
PTLKAKRPEMRNYFRKQIEELYANTSI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagaacccttgagctggccagggaggtacaagactatacctgtgcggatggca
aagtgggggctgcaagcaaaagtgagaacccaaaggacactaagacattcctcaaactta
caattttttagctcactcattgagaagatgcaagcaaaggaagtcttgaggaatctgcgg
ctacttgaattggatgaattcagccagttttttcataccattcctccaccaacactggtg
ggaattgcttcatttgcagctattgtagcatactggctaactaccagacccaaagccctg
aagccaccctgtgacctttcacaacagtcagtggaaattgaaggtgctgaccaagctcgt
gggtctgtattaggtgatagccttcagcttatgacacactaccacgatgatgcaaagacc
atgtatgaagtataccaacgaggattatatataacaggtgatggaccttgtttgggattc
agaaaacccaaacatccttatcaatggctttcttataaacaggtggcaactcgagctgag
gatttaggatctggattgctcaaaaaaaactgcagatcctcaccagaccagtttattggt
gtttttgcacaaaacagacctgagtggattattgctgagctggcatgctatacttactcc
atggtgatagtgccactttatgacacacttggacctgaagccattcgctacataattaac
acagctgagatttccacagttatctgtgacaaggtggaaaaagctaaaattcttttgaag
aatgtcgagaagaaggagactccaggcttgaagatagtaatcctcatggacccatttgag
atggacttggttgagatgggaaatgactgtggagtgcaaatactggcactccaggaggtg
gagaatcttggacgggtgaacagacaaactcctgtgcctccacgacccgaggacctatcg
attgtctgttttactagtggaacaacaggaaaccctaaaggagccatgcttacacatgga
aatgtggttgctgatttttcaggctttttgaaagtgacagagagccaatggctgcccaca
tctgatgatgtacatatttcctacttgccattagcacacatgtttgaaagaatggtacag
tctgtagttatatgccatggaggtcggataggtttcttccaaggtgacattaggctccta
tcagatgatatgaaagctcttcatccaactatttttcctgttgttccaagactgctaaat
cgaatgtatgacaagatctttagccaagcaggtacaccagtaaaacgctggctactggaa
tttgcagccagaagaaaggcaattgaagtgcgaaatggtatcataaggaatgacagcgta
tgggacaaactctttttcaaaaaaatacaggatagccttgggggcaaggtgagaatgatc
gtcacaggggctgctcctgcctctcctgctgtacttggtttcctccgagcagcattgggt
tgccaggtctatgaaggttatggacagactgagtgcacagctggatgtacctttaccaca
cctggagactggacatcaggtcatgttggggcccctctgccatgtaattatctcaaactt
attgatgtggatgaaatgaagtatttttctgcaaaaggagaaggagagatctgtgtaaaa
ggaccaaatgtgttcaaaggctacctcaaagacactgagaaaacagctgaagcactggac
aaagacggttggctgcatactggagacattggaaaatggttacctaatggcactttgaaa
atcatagaccgaaagaaacatatattcaaacttgctcagggagagtatattgcaccagaa
aaaattgagaatatctatgtacggagtgaacctgtggcccaagtgtacgtacatggagat
agtctgcagtccttcttggtaggtattgttgtaccagatccagaagcaacagaagcctgg
gcaagaaaaaggggttttgagagttcatatgcagaactatgtaaatcagagggttacaaa
aaagctattatggaggacttggtgaaactggggcaacaggctggcctttattcatttgaa
caaataaaagccatctatctccactatgaaatgttctctgtccaaaatggcctgttaacc
ccaacgctaaaggcgaagaggccagagatgagaaattacttccggaaacaaattgaggaa
ctttatgctaatacttctatatga
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