Scyliorhinus canicula (smaller spotted catshark): 119965343
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Entry
119965343 CDS
T11175
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119965343 (matn1)
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
119965343 (matn1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_3
hEGF
Copine
EGF_LRP2
vWA-TerF-like
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
119965343
NCBI-ProteinID:
XP_038651906
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All DBs
Position
1:98152434..98201630
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AA seq
497 aa
AA seq
DB search
MKGLFSGLLLFTLILVQVNGVPKVKPPKPGPQVPTGLCKTKPTDLVFIIDSSRSVRPSEF
EQVKVFVSQVIESLDISPNATQVGVVNYASTVKNEFTLNAHRNKASVLRAVSQIQPLSSG
TMTGLAIQFAKNIAFRESHGARVKANAASKVAIIVTDGRPQDRVRESATQAKQTGIEIFA
IGVGRAEMNSLREIASEPLEEHLDYVESYSAIEKLSNKFKEAFCVVDLCDSGDHDCEHIC
VSTPGSYKCACNEGFTLNPDGRSCGTCSSGGVDLAFVIDGSKSVRPENFQLVKRFINQIV
DALEIGDQNARIALVQYSSSVRTEFPLNKFKSKQNIKTAVKKMDYMERGTMTGLALQHLS
ENIFVPSQGARENIPKVGIVFTDGRSQDYINDFAQKAKDKGIRMFAIGVGNALEEELRII
ASDPVKDHYHYTADFKTMNQIADKLQVKICAAPPKDPCACESLVEFQRKVEKIIKTLTSK
LGAFTKKLAALENRLLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacttttcagtggattgctcctctttaccctaatcctggttcaggttaatggg
gttcccaaagtcaaacctccaaaacctggtcctcaggttccaactggtctttgcaagacc
aaaccaactgacctggtctttatcattgacagctctcggagtgtacgcccttctgaattt
gaacaggtgaaagtgtttgtgtcccaggtaatagaatcccttgacattagcccaaatgcc
acccaagttggggtggttaactatgctagtaccgtcaaaaatgaattcaccctcaatgca
catcgcaacaaggctagcgtcttgcgagctgtctcccagatccagccactctcctccggc
accatgactggcctcgccatccaatttgcaaagaacattgctttccgtgaatctcatggg
gcacgggtcaaagccaacgccgccagcaaggttgccatcattgtaactgatggccggcca
caggaccgagtgcgagagtcagccacacaagccaagcagactggcattgaaatctttgcc
attggcgtaggcagggcagagatgaactcactgcgcgagatcgccagcgaacctctggaa
gagcacttagactatgtggaaagctacagcgctatagaaaaactttccaacaaattcaag
gaagcattctgcgtggtggatctgtgtgacagtggagatcatgactgtgaacacatctgc
gtgagcactcctggctcttacaaatgtgcctgcaatgaaggatttacattaaatccggat
ggaagatcatgtggcacttgcagttcaggaggtgttgatttagcttttgtcatcgatggg
tcgaagagtgtgagacctgaaaacttccaactggtaaaaagattcatcaatcaaattgtt
gatgctctagaaattggtgatcagaatgcacgcattgcccttgttcagtactcaagttca
gtcaggactgaattccctctcaacaagttcaaaagtaaacaaaacatcaagaccgcagtc
aagaaaatggactacatggagagaggaacaatgacaggtctggcgctgcaacatctgtct
gaaaacatttttgtcccttcacaaggagcaagagagaacatcccaaaagttggaatcgtc
tttacagatggccgttcacaagattacattaatgatttcgctcagaaagccaaagataaa
ggaattaggatgtttgcaattggagtggggaatgcacttgaggaagaattaaggataatt
gcttcagatccagttaaggatcattatcattatactgcagatttcaagacaatgaatcaa
attgcagacaaattacaggtcaaaatatgtgctgcaccacccaaagatccatgtgcctgc
gaatcacttgtggagttccagagaaaggtcgagaaaataattaaaacactgacatcaaaa
ctaggtgccttcacaaaaaaactggcagctcttgagaacagactccttgtctaa
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