Scyliorhinus canicula (smaller spotted catshark): 119965412
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Entry
119965412 CDS
T11175
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119965412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119965412
Ion channels [BR:
scau04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
119965412
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2417
Motif
Other DBs
NCBI-GeneID:
119965412
NCBI-ProteinID:
XP_038652135
LinkDB
All DBs
Position
1:complement(309381015..309412524)
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AA seq
492 aa
AA seq
DB search
MRKSGMFCHLSMDNRVLRGCHLLLTFSIFLGRSIYCQEKTRSQAEERLFKHLFTGYNRWT
RPVANTSDAVIVNFGLSIAQLIDVDEKNQMMTTNVWLKQEWYDYKLTWNPLEFDNVTSIR
VPSEMIWIPDIVLYNNADGEFAVTHMTKAHLYSTGRVQWVPPAIYKSSCSIDVTFFPFDQ
QNCKMKFGSWTHDKSKIDLRSMGRNVDLKDYWESGEWAIVNAVGIYNRKKYDCCSEVYVD
ITYSFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSGCGEKITLCISVLLSLTVFLLLI
TEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPNTHKMPRWVRKVFLDFI
PRWLFMKRPGPKAETFTNHFSLLELKIDPSTSCPTTQRDAPCFSLPLCHPRPTELRSHGY
QCHHEPSRYPRGRANHSQRNSLNNGSQGESLLLLSPSIIRALEGVHYIANHLRAEDADFS
EFRRTGVTELFI
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaagtggaatgttttgtcatttatccatggataacagagtactgcgaggttgc
cacctcctcctcaccttctcgatcttccttggcagaagcatttactgccaggagaagact
cgctcacaggcagaggagagactcttcaaacatctcttcactggctataatcgatggacc
agacccgtggccaacacttcagacgctgtcattgtcaactttggactttccattgctcag
ctgattgacgtggatgagaaaaaccagatgatgacaaccaatgtttggctcaagcaggaa
tggtatgattataaactcacatggaatcccctggagtttgacaatgtgacttcaatccgg
gtgccgtctgagatgatctggattcctgacattgttctttacaacaatgcagacggggag
tttgctgtgacacacatgacaaaggctcacctctactctacgggcagagttcagtgggtg
cccccagccatctacaagagctcctgcagcattgacgtcacattcttcccattcgaccag
cagaattgcaaaatgaaatttggttcctggacccacgacaagtctaagattgatttgagg
agcatgggcaggaacgtggatctcaaggactattgggagagtggcgagtgggcaatagtc
aacgctgtgggaatttacaacagaaagaagtatgactgttgctctgaggtgtatgtcgat
atcacatactctttcattatccggaggctccccctcttctacaccattaacctcatcatt
ccctgtttgctcatctcctgtctaactgttctggtcttctatttaccatcaggctgtgga
gagaagatcacactttgtatatcggtgttgctctccctcactgtcttcctgctgctgata
acagagatcatcccctccacctccctggtcatccctttaatcggcgaatacctgctcttc
accatgatcttcgtcactctctccattgtcatcaccgtctttgtcctcaatgttcatcat
cgctcgcccaacacacacaagatgccccggtgggtacgaaaggttttcctggatttcatt
ccacgttggctcttcatgaagaggcccggacccaaggcggaaacattcaccaatcatttt
agcctgctggagttgaagatcgacccctccacgagctgccccacaacacagcgtgatgcc
ccctgtttcagcctgcccctgtgccaccccaggccaacggaactccgcagtcacgggtat
cagtgtcaccatgaacccagcaggtacccgagagggagagccaatcacagccagagaaac
agcctgaataatggcagtcagggtgaatccctgttgctgctctcccccagcatcatcagg
gcactggagggagtgcactacatcgccaatcacctccgcgccgaggacgctgacttttca
gaatttcgaagaacgggtgtaacagagttatttatttga
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integrated database retrieval system
