Scyliorhinus canicula (smaller spotted catshark): 119965417
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Entry
119965417 CDS
T11175
Symbol
gria1a
Name
(RefSeq) glutamate receptor 1a isoform X1
KO
K05197
glutamate receptor 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119965417 (gria1a)
04082 Neuroactive ligand signaling
119965417 (gria1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119965417 (gria1a)
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119965417 (gria1a)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
119965417
NCBI-ProteinID:
XP_038652107
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Position
4:complement(226107632..226351605)
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AA seq
897 aa
AA seq
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MQRSILTVLCSALLGCVLGAFPSSLQIGALFPKQQSQEYSAFRFGLSFYNTDTMYKLITQ
TENVDISNSFAVTNAFCSLFARGVYAIFGFYDRKTVNTLTSFCGALHLSFITPSFPVDTS
NQFVIQMRPDLQNALLSLIEHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVSIE
TTTEEGYRMLFKDLEKRKDRHVIIDCEADKLNTIMNQIINIGKHIRGYQYIFVSLGFLDM
DLDKFQYAGANVTGFQIVRPDSAQVSKFLQRWKKLDGKEYQWVEGHKLKYTSAMTFDGVL
VLSEAFKYLRKTRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRSDGLTGNIQFNEY
GHRTNYTVNVLELKSDGIRKIGFWNEDDKFVGTTGDHHIGNDTSGIQNRTYFVTTILEPP
YVMLKKNHEQLEGNDKYEGYCVELAAEIAKHVGFKYKLAIVADGKYGARDPDSKAWNGMV
GELVYSKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE
IWMCIVFAYIGVSVVLFLVSRFSPYEWQTEEYEEGADAQSLDQTNEFGIFNSLWFSLGAF
MQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE
IAYGTLDAGSTKEFFRRSKIAVFEKMWAYMKSAEPSVFVKTTEEGVIRVRKSKGKYAYLL
ESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNPVNLAVLKLNEQGLLDKLKN
KWWYDKGECGSGGSDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRTEATR
MKQLSISEAMRSSERVPAQGGTGENGRLVTHDYSKSMQTLPRMSHTSGMSLGATGIS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgctccatcctcaccgtgctgtgctcggcattgctgggatgcgttttgggagct
ttccccagcagcttacaaatcggtgctctcttccccaagcaacaatcccaggaatattcc
gccttccgattcggattatcgttctacaacacagacaccatgtacaaactcatcacccag
acggagaacgtggacatcagcaacagtttcgcggtcacgaacgccttttgctcgctgttt
gctcgcggagtctacgcaatctttgggttttacgacaggaagacggtaaacacactcaca
tccttttgtggagctctgcacctctcgttcatcactcccagcttccccgtcgatacctcc
aaccagttcgtcattcagatgaggcctgacctacagaatgcgctgctcagcctcatcgaa
cactacaagtggcagaagtttgtgtacatttacgatgctgatcgcggactgtccgtccta
cagaaggtgctggatacggctgcggagaagaactggcaggtgacggcagtcagtattgag
accaccacggaagaaggctatcggatgctcttcaaagacttggaaaagagaaaggatcgg
cacgtcataattgactgcgaggcggataaactcaacaccatcatgaatcagatcataaac
ataggaaagcacattcgaggatatcagtacatctttgtgagcctgggtttcttggacatg
gatctggataagtttcagtatgcaggggcgaatgtgactggcttccagatcgtgcggcct
gacagtgctcaagtctcaaaattcctccagcgctggaagaaactggatggcaaagagtat
cagtgggttgagggacataagctgaagtacacatcagccatgacctttgatggagtactc
gtgttatcagaagccttcaagtatctgcgcaagacaaggatcgacatctcgcggagaggc
aacgcgggagactgtttggcaaacccggccgtaccttggggtcaagggatagacattcaa
cgagctttacagcaggttcgtagtgatgggctgactgggaacattcaatttaatgaatac
ggacatcggactaactacaccgtcaatgtgttggagctgaaaagtgatggaattcgaaag
attggtttttggaatgaagatgacaagtttgtggggacaacaggggaccatcacattggc
aacgacaccagtggcatccagaatcggacatactttgtaacgacaatcttagaaccccct
tatgtgatgctgaagaaaaatcacgaacagctggagggcaatgataaatacgagggttac
tgcgtagagctggccgcagagatcgccaaacacgtgggcttcaagtacaagcttgcaatc
gtggcagacggaaaatatggagcgagagatccggattcgaaagcgtggaatgggatggtc
ggcgagctcgtttattcaaaagctgatatcgcagtggccccattgaccatcactttggtg
cgggaggaggtcattgacttttccaaacccttcatgagtttggggatctccatcatgatt
aaaaagccccagaagtccaagccaggggttttctccttcctggaccccttggcgtacgag
atctggatgtgcattgtgtttgcctacattggcgtgagtgtggtcctgttcctggttagc
agattcagcccgtatgagtggcaaacggaggagtacgaagaaggagccgatgcccaaagt
ctcgaccagaccaacgagtttggaatatttaacagtctctggttctctctgggcgccttt
atgcagcaaggatgcgatatttcgccaagatctctgtcaggtcgaattgtcggtggcgtt
tggtggttcttcaccttgatcatcatctcatcctacactgccaacctagctgccttcctg
acagttgaacgaatggtctcacccattgagagcgcagaggacctcgcaaagcagacagag
attgcctatggaacactcgacgccggatcgacaaaagagttcttcaggagatcaaagatt
gccgtctttgagaagatgtgggcttatatgaagtctgccgaaccttcagtctttgtgaaa
accactgaggaaggtgtaatccgagtgaggaagtccaaagggaagtatgcctatctcctc
gaatcgaccatgaatgagtacattgagcagaggaagccctgtgataccatgaaggttgga
ggtaacctcgactccaaaggatatggagtggctacacccaaaggttcgcccttaagaaat
cccgtaaacctggcagttcttaaactgaacgagcagggcctgttggacaaattgaaaaac
aaatggtggtacgacaagggggagtgcggcagtggaggcagtgactccaaggacaagacg
agtgcgctgagcctgagcaacgtagcaggggttttctacatcctgattggtggccttgga
ctggcaatgctcgtggccctggtggagttctgttacaagtcaaggacagaagcaacacgt
atgaagcagctttcgataagtgaagcgatgaggagctcagagagggtcccagcacaggga
ggcaccggagagaacgggcgccttgtaacccatgactacagcaagtccatgcaaacctta
ccccgcatgagccatacgagtggaatgagcctgggtgccacagggatttcataa
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