Scyliorhinus canicula (smaller spotted catshark): 119965449
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Entry
119965449 CDS
T11175
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119965449 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119965449 (rbm22)
Spliceosome [BR:
scau03041
]
Complex B
Other components
Prp19-related factors
119965449 (rbm22)
Complex C
119965449 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
zf-CCCH_2
Nup35_RRM_2
zf-CCCH
RRM_occluded
zf-CCCH_4
RRM_3
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
119965449
NCBI-ProteinID:
XP_038652170
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All DBs
Position
4:complement(232105821..232139036)
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AA seq
423 aa
AA seq
DB search
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICSRPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGISLKDEMPKSDVNKEYYTQN
MEREIQNSDGTRAVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRAATMPRLDPPEDKSITTLYVGGLG
EQISETELRNHFYQFGEIRSITVVQRQQCAFIQFATRQSSELAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKEKDSNVTESGMKLEPVPGLPGALPPLPPIIEEEPPTNFFNLPPSAPP
AVMNISLPPPPGLAPPPPPGFGAALFHGLPPPPPPFLRAPGPIHYPSQDPQRMGAHTNKP
SSA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgctgggagcgaacacgtacaaccggcagaactgggaggacgcggatttt
ccgattctgtgccaaacatgcctgggagaaaacccttatatcagaatgacaaaagaaaaa
tatggaaaagagtgcaagatctgctctcggcctttcactgtcttccgctggtgtccggga
gcccggatgcgttttaagaaaaccgaagtctgccagacgtgtagcaagctgaagaacgtg
tgccagacttgcctgctggaccttgaatacggattgcccatccaggtccgcgatgcggga
atatcgctcaaggacgagatgcccaagtctgacgtcaacaaggagtattacacacagaac
atggagagagagatccagaactcggatgggacgagagcggtgggtgctctgggcaaggcc
accagctccagcgacatgctgctgaagttggccaggaccacaccgtattacaaacgcaat
cggccacacatctgttccttctgggtcaaaggagaatgcaagcgtggagaggagtgccct
tacagacatgaaaagccaacagacccggatgatccattggccgatcagaacatcaaggat
cgttactacggcattaacgacccagtggctgacaagttgctgaagcgggcggcgaccatg
cccaggttggacccgccagaggacaagtcgatcacaaccctctacgtgggaggccttggg
gagcagatctcggagacggagctgcggaatcatttttaccagtttggcgagattcgctcc
atcactgtggtccagcggcaacaatgcgcattcatccagttcgccacccggcagtcgtca
gagctggcggctgagaaatcattcaacaagctcatcattaacgggcgcaggctcaacgtg
aagtggggccggtcgcaagctgcccgagggaaagagaaggaaaaggactcaaatgttacg
gagtcaggaatgaaattggagcctgttccagggctgcctggtgcgttgcctccgctgccg
ccgatcatcgaggaggagccccccaccaacttcttcaacctcccccccagcgctccgcct
gccgtgatgaacatatcgctgcctcctccgccgggtctcgcaccgcctccaccgccaggt
ttcggagccgccttgttccatggtctgcctcccccacctcctcccttcctacgggctcca
ggccccatccattacccatcccaggaccctcagcggatgggtgctcacacaaacaaaccc
agtagcgcctaa
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