Scyliorhinus canicula (smaller spotted catshark): 119965472
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Entry
119965472 CDS
T11175
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119965472
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119965472
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119965472
NCBI-ProteinID:
XP_038652219
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Position
4:234311771..234314592
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AA seq
798 aa
AA seq
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MADSQSNNAWKFMVMVSVVLICALDVVSAQIRYSVPEEMEQGAVIGNIAEDLGLNIATLS
GQKGRLVTDYTERYLEVDLENGLLFANERIDRDKLCGPITTCVLSFQIVFENSPEMYRGE
VEILDINDNSPSFPESVNLLRMAETMAPGSSFPLESALDPDVGTNAVADYNISPNEHFGL
KVEIAEDGTKIVELLLEKPLDREVHSSFQLMLTATDGGSPPRSGTARILITVLDSNDNAP
AFDSKTYKVSLIENSPRGTLVVSVHATDPDEGSNAEVTYSFRNRVSRKMQELFSLDPRTG
EIRVQGIIDYEGASTYSLDVQAVDNGSPAIAGHSKVFINVIDVNDNAPGIKVTIVSSRVP
ENAAPGTVTALVNVIDRDSGKNGQVYCEIQNSVPFKLQTSSSGHYKVITSDTLDRETTPL
YNIAILARDSGLPPLSTNKTIQITVSDINDNAPRFARPMDTVYVMENNAPGASIFAVTAF
DPDQDQNSYVSYSFIDNLIQELTLSNYLILNSMNGTIYALRSFDYERVKNFQIQVQARDA
GVPPLSSSATLNVIILDQNDNAPVIVSPSVQSGSAGVEVVPQSAGQGYLATKIIATDADS
GQNARLLYQMLKATDPSLFIVGLNSGEIRTARGILEQDSTTQSLVILVKDNGQPSLSSTA
TIHFSISGNVTEIFSERSNLVTNPEYVSDTNLYLIVILGSTSFIFLVTIILLIGIKCKQD
RNTPEDYNSPSCCSGLDDSKNSFNLRPTLKESLNYTGAGENIRIPDAHHYSVCLSPESAK
SDFLFLKPYTPPMSQDQY
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggctgactcacaaagcaacaacgcctggaaattcatggtgatggtttctgttgtattg
atttgtgcactggatgtggtttctgcgcagattcgttattcggttcccgaggaaatggag
caaggtgctgtaattggtaatattgctgaagatttggggctgaatattgcaacattgtca
ggtcagaaaggtcggctggtcactgactacacagaacgctatttggaagtagatttggaa
aatggcttgttgtttgccaatgagagaatagacagggacaagctttgtggaccaatcacc
acatgtgttctctccttccaaatagtgtttgaaaattctccagagatgtaccgcggtgaa
gtggagattcttgatataaatgataattcgcccagtttcccggagagcgtcaatctctta
cgaatggccgaaaccatggcgccaggctccagctttccgctagagagcgctctcgatcca
gacgttggaacaaatgcagtcgctgattacaatatcagccccaatgagcacttcggtcta
aaagtggagattgcagaggacggtactaaaattgtcgagttgttattggagaaaccgttg
gatcgcgaagtgcactcatcctttcagctgatgctgacggccactgacggagggagtcct
cccagatctgggaccgctcggattctcatcactgtgctggacagcaacgacaatgcccct
gcgttcgatagcaagacctacaaggtcagcctgatagaaaactcacccagaggtaccttg
gtggtttcagtccatgccactgatccagacgaaggttcgaacgcggaggtaacttattct
ttcagaaaccgcgtttcacgaaaaatgcaggaactgtttagtttggatcctcgaacagga
gagattcgtgttcagggcataattgattatgaaggagcaagcacttattcacttgatgtt
caagctgtagacaatggttcaccggcaattgcaggacattctaaagtgtttattaacgta
atagatgtcaatgataacgcccctgggataaaagtgaccatagtgtctagcagggtacca
gagaatgctgcccccgggactgtgacagcactcgtcaatgtaatcgaccgagattctggg
aaaaatgggcaggtgtactgcgaaatccagaacagcgttccctttaaacttcaaacatct
tcgagtggtcattacaaagtgataaccagtgacacgttggaccgtgaaaccacccctctg
tacaacatagctattttagccagggactcggggttacctccactatcaacaaataaaaca
attcagataacggtttctgatataaacgataacgccccaaggtttgctcgacccatggac
acagtgtatgtgatggagaacaacgctcccggtgcttccattttcgcagtgactgctttc
gaccctgatcaggatcagaactcctacgtctcttactctttcatagacaaccttattcaa
gagttaacattgtcaaattacctcattcttaattcgatgaacgggaccatttacgcgcta
cgctcttttgactacgagcgagttaaaaacttccagattcaagtccaagcccgagacgct
ggcgttccccctctgagcagcagcgcaacattgaatgtgatcatcctggatcagaatgac
aacgctccggtaattgtttctccttcagtacagagcggatcagcaggagtggaagttgtg
cctcagtcagcgggccaggggtacttggccaccaagataatcgcaactgatgctgattcc
ggtcagaatgcacggctcctctatcagatgctgaaagccactgaccccagtttgttcatc
gtggggcttaattctggagaaatcagaacagcccgaggaattttggagcaggattctacc
acccagagccttgtgatcttggtgaaggataatggacagccgagtctttccagcacggct
acaatccacttttcaatctcgggcaatgttactgaaatcttctccgaacgtagcaactta
gtgacaaatcctgaatatgtctctgatacaaatctttatttaattgtcattttaggctca
acttcctttatatttcttgtaaccatcattttgctgattggcatcaagtgtaaacaggac
agaaatactcctgaagactacaactccccaagttgttgctctggactggacgattctaaa
aattcctttaatctgagacccacactgaaagaatctttaaattatactggagctggagaa
aatattcgcatccccgacgcgcatcattattcagtttgtctgtctcctgaatcagcaaaa
agcgattttctgtttttgaaaccctacacaccgcccatgtctcaggaccaatattaa
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