Scyliorhinus canicula (smaller spotted catshark): 119965475
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Entry
119965475 CDS
T11175
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119965475
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119965475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119965475
NCBI-ProteinID:
XP_038652222
LinkDB
All DBs
Position
4:234367100..234371494
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AA seq
924 aa
AA seq
DB search
MNAGLCVLWLYTVKIIILIAAPHIRSCAALRKTGVMQGADSLCRCGPMRISNTSRDLLLL
LRHISRTGTESQSVPAIILWKGLCEFARHSDIKVFCRLCDRAALDLNKLPVYFCASPNIT
AMAEPRITNALKFRPLGIIFLLFVSDLVFGKIHYSIREEMESGAFIGNVAEDLGLSIRRL
SARKFRLVPADKRQCLEVNSETGILFASERLDREQLCGQMPACVLSFQIVVEEPLEMYRG
EVEILDINDNSPSFPESVILLQMAETMAPASRFPLESALDPDMATNAVSVYNISPNEHFG
LKVETAEDGTKIVELLLEKPLDRERQSSFQLMLTATDGGNPPRSGTARILITVLDINDNA
PAFVSKSYKASLIENSPRGSLVVSVLATDPDEGTNGEVTYSFSNRVSQKMQELFSLDPRT
GEIRVQGIIDYEEDDNFSLDIHAVDNGSPAIAGHSKVLVKVIDVNDNAPGILLTSVAGIV
PEDAAPGTVTALIDVIDRDSGKNGEVHCEIPKNVPFQLQSSSRGHYKLITSDMLDRETTP
LYNIVIVARDSGSPPLSTNKTIQITVSDINDNAPRFARPMDTVYVMENTAPGSSIFAVTA
FDPDQDQNSYITYSFMENLIRDLPLSNYLNLNSKNGTIYALRPFDYERMKNFQIQVQARD
AGVPPLSSSATLNVIILDQNDNAPVIVSPSAQSGSAGVVIVPQSAGQGHLVTKIIATDAD
SGQNARLIYQLLKANDPSLFIVGLHSGEIRTARGILEQDSPTQSLVILVKDNGQPSLSTT
ATIHFSILGNVSGIFAESSNFVTNPEYVSDINLYLIIILGSTSFIFLITIILLIGIKCKQ
DRNTPEDYNSTSISYGLDDSNNAFNLRPTLKESLNYTGAGEIIHIPETHHYSVCLSPESA
KSDFLFLKPYTSPMSQDQCPIQNN
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccggattgtgcgtattatggttgtacactgttaaaataatcatcctgattgca
gctcctcacatcaggagctgtgcagctttaagaaaaactggtgtaatgcaaggggctgac
tcgctgtgtcgctgcggaccaatgaggatctcaaatacaagcagagatctattgctcctc
ctccggcacataagcagaacaggaacagaaagtcaatcggtgcctgcaatcattctgtgg
aaaggtctctgcgaattcgcacgacattctgacattaaggtattttgtcgattatgcgat
cgggcagcgcttgacctgaataagctaccggtttatttttgcgcctctccaaatataacc
gcaatggcagagccacggataaccaacgccttaaaattcagaccattgggtattattttc
cttctttttgtatcggacctggttttcggaaagatacactattctatacgcgaagaaatg
gagtctggcgcgtttattgggaatgtcgccgaagatttgggattgagcattcggaggctg
tcagctcggaaattccgactggttcctgctgataaaaggcaatgtttggaggtgaattct
gaaaccggcattttatttgcgagcgaaaggttagatagggagcagctgtgcgggcagatg
ccagcttgtgttctttctttccagattgtagtggaagaacctttggagatgtaccgcggc
gaagtggagattcttgatataaatgataattcacccagtttcccggagagtgtcattctc
ttgcaaatggccgaaaccatggcgccagcctctcgatttccgctagagagcgctctcgat
ccagacatggcgacaaatgcggtctctgtttataacatcagccccaatgagcacttcggt
ctaaaagtggagactgcagaagacggtactaaaattgtcgagttgttattggagaagccg
ctggaccgcgaacggcaatcatcctttcagctgatgctgacggccactgacggagggaat
cctcccagatctgggaccgctcggattctcattactgtgctggatatcaacgacaatgcg
cctgcgttcgttagcaagtcatacaaagccagcctaatagaaaactctccaagaggctcc
ttggtagtttcagtccttgccactgatccagacgaaggtacgaacggggaggtaacttat
tctttcagtaaccgtgtttcacagaaaatgcaggaactgtttagtttggatcctcgaaca
ggagagattcgtgttcagggtataattgattatgaggaagatgacaatttttcacttgat
attcatgctgtcgacaatggttcaccggcaattgcaggacattctaaagttctggttaag
gtaattgatgtaaatgataacgcccctgggattttactgacgtccgttgctggcatagtc
cctgaagatgctgctcccgggactgtgacagctctgattgatgtaatcgaccgagattca
ggaaaaaacggagaggtgcactgcgaaatccctaagaacgttccctttcaacttcagtca
tcttcgagaggtcattacaaattgataaccagtgacatgttggaccgtgaaaccacccct
ctgtacaacatagttattgtagccagggactcggggtctcctcctttatcaacaaataaa
acaattcagataactgtatctgatataaacgataacgccccaaggtttgctcgacctatg
gacactgtgtatgtgatggagaacaccgctcccggctcttctattttcgcagtgactgct
ttcgatcctgaccaggatcagaattcctacatcacttactctttcatggaaaatctaatt
cgagatttaccgttgtcaaattatctcaatcttaattcgaagaacgggaccatttacgcg
ctgcgcccctttgactacgagcgaatgaaaaacttccagattcaagttcaagcccgagac
gctggcgttccccctctgagcagcagcgcaacattgaatgtgatcatcctggatcagaat
gacaacgctccagtaattgtttcaccttcagcacagagcggatcagcaggagtcgtgatt
gtgcctcagtcagcgggccaggggcacttggtcaccaagataatcgcaactgatgctgat
tctggtcagaacgcacggctcatctatcagctgctgaaagccaatgatcccagtctgttc
atcgtggggcttcactctggagaaatcagaacagcccgaggaattttggagcaggattct
cccactcagagtcttgtgatcttggtgaaggataatggacagccgagtctctccaccacg
gctacaatccacttttccatcttgggcaatgttagtggaattttcgccgaaagcagtaac
ttcgtgacaaatcctgaatatgtctctgatataaatctttatttaattatcattttaggt
tcaacttcctttatatttcttataaccatcattttgctgattggcatcaagtgtaaacag
gacagaaatactcctgaagactacaactccacaagtattagctatggactggacgattct
aataatgcctttaatctgagaccaacactgaaagaatctttaaattatactggagctggc
gagattattcacatccctgaaacgcatcattattcagtttgtctgtctcccgaatcagca
aagagcgattttttgtttttaaagccctacacatcgcccatgtctcaggaccaatgtcca
attcaaaataattga
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