Scyliorhinus canicula (smaller spotted catshark): 119965483
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Entry
119965483 CDS
T11175
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119965483
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119965483
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119965483
NCBI-ProteinID:
XP_038652228
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Position
4:234582398..234630519
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AA seq
801 aa
AA seq
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MANMLSSRASFIFLLCISGLISGQIRYSIPEELEYGAFVGNIAEDLRRNAGELSGRNVRL
VSDKRRQYIEVNLENGMLFINERIDREQLCGQSPSCSLSFQIMLENPSEMRRLAVEILDI
NDNAPSFSKDEYSFRIIEVIAPGTRLPLESAHDPDIGTNAISTYHISPNEHFGLRVQTRN
DGTKSAELLLEKPLDREKQSTLFLVLTATDGGVPHRSATTRIVVNIRDANDNAPVFDHET
YTTSVLENTPKGTLVIKLNAFDLDEGTNAELTYSFNSHVSQKARELFIVDSITGEIRVEG
VLDFEESYMYELDVEAVDKGHYPMAGHAKVMVGLIDVNDNAPRIEVTSIYSTVPEDAQPG
TVIATISVTDADSAENGQVKCDVPVDIPFKFEPSFNNNYKLVTSGNLDREVSPLYNISIR
ARDKGSPHLETRKNIMVTVSDVNDNSPMFTQSSYNVFVTENNWPGASIFTVTASDPDLDQ
NGDVSYLMLENNTKYASASPYVMINSKSGDINTLLSFDYELLKCFKIIVQAQDAGSPSLS
STAIVNVIILDQNDNAPIIVSPLAWNSSLAVEILRQSIIPGYMITKVIATDVDSGQNMRL
SFQILEATDPSLFSLGRLSGEIRAARRFRDHDSTIHRVIIQVKDNGQPSLTSAATIFVSI
LQNVTENVSVRSHQPRSPEQLSELNAYLIIMFGSTSFIFLVIIIFLVVLKCKQNSNANYY
SSTSCCCCMRRNSNEVFNRRAVPKEIPHYSGRQTLPISDTHQYTICLAPESAKSDFLFLK
PCEATLPMNDLNVRGGSVRKL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatgctgagcagccgggcgtctttcattttcctgctctgtatatcgggcctg
atttcaggacaaattcgctactcgattcccgaggagctggagtacggggcctttgttggg
aacatcgctgaggatttgagacgaaacgctggagaattatcgggccgcaatgttcggctg
gtctccgacaagaggaggcaatacattgaggtaaatctggaaaatgggatgttatttatt
aatgaaaggatcgacagagaacagctttgtggacaaagccctagctgttcactttcgttt
caaataatgctggaaaatccttcggaaatgcgtcgccttgcagttgaaatactggatata
aatgataatgcgcctagtttttcaaaggacgaatattctttccggattattgaggtaatt
gcgccagggacgcgtttgcctctcgagagcgcgcacgatccggacatcggcacaaatgca
atcagcacttaccacatcagcccaaacgaacacttcggcctcagagttcagacaagaaac
gatggaactaaaagtgcggaactgctcttggagaaacccttggaccgtgaaaagcagtca
acactttttcttgtgctgaccgctactgacggcggtgttccccatagatctgcaactact
cggattgttgttaacattcgggatgcgaatgacaacgcaccagtatttgatcatgaaaca
tacacgaccagtgttctagaaaacacccctaaaggaacgttagtgataaaactcaatgca
tttgatttggatgaaggtacaaacgctgaactaacatattctttcaacagccatgtttcg
caaaaggctcgtgaattgttcatagtggactcgataactggcgagataagagttgaagga
gtattagattttgaagaatcatatatgtatgaacttgatgtagaagctgtggataaaggt
cattatccaatggcagggcatgccaaagttatggtcggactgattgatgtgaatgacaac
gcccctaggatcgaagtgacgtcgatatacagtacagtaccggaagatgcgcagccgggg
actgtgatagccacaatcagtgtgacggatgcagactctgctgaaaatgggcaggttaaa
tgtgacgttcccgtggatataccgtttaagtttgagccctcattcaacaataactataaa
ttagttacaagtggtaatttggatcgggaagtgagcccgctctacaatatatcaataagg
gcccgggacaaaggatctccgcatcttgaaacaagaaaaaatataatggtgacagtctct
gatgtaaatgacaattctccaatgtttacacaatcctcctataacgtgtttgtgacggaa
aacaattggcccggtgcctctatttttacagttaccgcttcagatccagatctggatcag
aatggagatgtttcctatcttatgttggaaaacaatacaaaatatgcatctgcatctcct
tatgttatgattaactcgaagagtggggacatcaatacactgctttcatttgattatgaa
ctgctgaaatgtttcaagattatcgttcaagctcaagacgccggatctccctccttgagc
agcactgccattgtgaatgttattatcttggatcaaaacgacaatgctccaataattgtt
tcacctttagcttggaacagttccttagctgtggagattctgcgtcaatccataatccca
ggctatatgatcactaaggtaatcgcaacagatgtggattctggacagaatatgcggctt
tccttccaaattctagaggccactgatcccagtctcttcagtctgggtcgactctctgga
gaaatcagagcagcgagacgtttcagggatcatgactccaccatacatcgagtgataatc
caggtgaaggacaatgggcagcccagtctcaccagcgcagctactatcttcgtttcaatc
ttacagaatgttactgaaaatgtctcggtgcggagtcaccagcccagaagtcctgaacaa
ttgtctgagctgaatgcttatttaatcatcatgtttggctcaacgtccttcatatttctt
gtaataatcattttcctggtggtcctgaagtgcaagcagaacagtaatgcaaattattac
tcgtccacaagttgttgttgctgcatgcggaggaattcgaatgaggtctttaaccgcaga
gctgtccccaaagaaattcctcattattctggccgccagacgcttcccatttctgacaca
catcagtacacgatctgtttagctccagaatcagccaaaagtgatttcctgttcctaaaa
ccttgcgaagcaactttacctatgaatgatttgaatgtccgtggtggcagcgtgcgaaaa
ttatag
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