Scyliorhinus canicula (smaller spotted catshark): 119965484
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Entry
119965484 CDS
T11175
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scau04515
]
119965484
Cell adhesion molecules [BR:
scau04515
]
Cadherins
Protocadherins
119965484
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119965484
NCBI-ProteinID:
XP_038652230
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Position
4:234677514..234681634
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AA seq
797 aa
AA seq
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MANILRSAPLFILLLCVVDLVSGQIHYSIPEELERGAFVGNIAEDLALKIWELPARKFRL
ASDDRQQYIEVHQENGILFVNERIDRELICRQSAPCSLSFQVALDNPLEIHHVTVEIIDV
NDNSPSFSKDVFSLQIGELTAPGARFPVERAHDPDVGSNTISNYQISPNEHFGIKVQTRT
DGSRTAELLLEKPLDREQQSSFHIVLTASDGGVPHRSGTAQIHVIVVDGNDNAPIFDQEI
YRATLPENSPQDTLVTIINAVDLDQGVNAELTYSFTSHVPERIGELFKLDPRTGEIRVRA
VLDFEESDVYELDVRAVDNAPPVMTGHAKVLINLIDVNDNVPEIEVGSLSSSVPEDAVPG
SVIAAIRVTDLDSGENGQVKCEVSGDVPFKLQRFLTNNYKLVTRGPLDRETAELYNISIS
AWDGGAPPLFTSRTILVSVADINDNAPRFAESSYKVYLLENNTPGGSLFIVTALDSDLDQ
NGEIIYSILENQIDEGPASAYVTINSKNGNLYAIRSFDYEKLKYFHVKVQAQDVGSPPLS
STTIVNVIILDQNDNAPVIVSPLTLNSSASVEVVPRSVYPGYLITKLIATDADSGQNARL
CYQLLGATDPSLFTVGSLTGEVRATGRFREENLIVERLILSVKDSGQPSLSTTVTVSFSI
VPNITVTSSERSNAPILSEHFSDLNRYLIIILGSTSFLFLVTIIFLIVLKFTQNRNIAEN
YTSTACSYRRSNSNTGFNQTPAPKQTLNYSVPAQTEGFGYTVCLSPESSKSDFLFLKPCH
PTLPFSEVNVRDTKAMN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatactcaggagcgcgccgttgtttattttactgctttgtgtggtagacctg
gtttccggacaaattcactactcgattcccgaggaactggaacgtggggcctttgtaggg
aatatcgctgaggatttagcgctcaaaatctgggaattgccggctcggaaatttcggttg
gcatctgatgacaggcaacaatacatagaggtacatcaagaaaatgggattttatttgtt
aatgaaagaatcgaccgtgagctgatctgtcgacaaagcgctccgtgttccctttcgttt
caagtggcactcgataatcctctggaaatccatcatgtcacagtggaaataattgatgta
aatgacaattcacctagtttttcgaaggacgtattctctctgcagatcggtgagttaact
gcgccaggggcgcgcttccctgtcgagcgcgcgcacgatcctgacgtgggttcaaataca
atcagcaattaccaaatcagcccaaacgagcacttcggaattaaagtacagacaagaaca
gatggcagtagaactgctgagctgttattggagaagccgttggatcgtgaacagcagtcc
agctttcatattgtactgacggccagtgacggaggggttcctcacagatctggcacagca
cagattcatgttatagtagtggatggcaatgataacgcacccatattcgatcaggaaatc
tatagagcgacattaccagaaaactcccctcaagataccttagtgacaattatcaatgct
gttgatttagatcaaggcgtgaatgctgagttgacctattctttcacgagccatgtgccc
gaaagaattggcgagctgttcaaattggacccgagaactggagagatcagagttcgggca
gtattggactttgaggagtcagatgtttatgagcttgatgtacgagccgtggacaacgct
ccacctgttatgactgggcatgccaaggttttgatcaatctaattgatgtgaatgataat
gtccctgagatagaggtgggatcattgtcaagcagcgtccctgaagatgctgtgccaggc
tcggtaattgctgcaatcagggtcacagatttagattctggagaaaatggtcaggtcaag
tgcgaagtgtccggagatgttccatttaaacttcaaaggtttttgacgaataactataaa
ttggtaacgcgaggccctctggatcgcgaaactgccgaactctacaatatttctatttca
gcctgggatggaggtgccccccctctttttacaagcagaactattttggtttccgttgcc
gatatcaacgacaacgcacctcgcttcgcagaatcctcatataaggtatatctgttggag
aacaatactcctggaggatctttatttattgttaccgctttggattcagatttagatcag
aatggggaaatcatctattcaattttggagaatcagattgacgagggtccggcgtcagcc
tacgtcacaattaactctaaaaatgggaatctttacgcgattcgttcctttgactatgaa
aaactgaagtatttccatgtcaaagttcaagctcaggatgttggatctcccccgctaagc
agcaccaccatcgtgaatgttattatcttggaccaaaatgacaatgctccggttatcgtt
tcacctttaacattgaacagttcagcatcagtagaggttgtgcctcggtcagtttatcca
ggttacttgatcaccaagttaatcgcaactgatgccgattccggacagaacgcacggcta
tgctaccaactgttgggggctactgatcccagtctgttcacagtggggtctttgactgga
gaagtaagagcaactggacgattcagagaggaaaacctcattgtggaacgattaatcctt
agcgtgaaggacagtggacagccaagcctctccaccacagtcacagtctcattttcaatc
gtccccaatattactgtaacatcttctgaacgaagtaacgccccaatcctgtccgaacat
ttctccgatttaaatcgttatttgatcataattttggggtccacttcatttctttttctc
gtcaccataatttttctgatcgtcttgaagtttacccaaaatagaaacattgcagaaaat
tacacatctacagcttgttcttacaggcgaagcaattcgaataccggttttaatcagaca
cctgcaccaaaacaaactttaaattacagcgttcctgctcaaacagaaggttttggttat
actgtctgtttgtcaccagagtcttcaaaaagtgattttctatttctaaaaccatgtcat
ccgactttgccattcagtgaagtgaatgtccgggatacgaaagcgatgaattaa
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