Scyliorhinus canicula (smaller spotted catshark): 119965793
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Entry
119965793 CDS
T11175
Symbol
fars2
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase, mitochondrial
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119965793 (fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scau01007
]
119965793 (fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119965793 (fars2)
Enzymes [BR:
scau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
119965793 (fars2)
Amino acid related enzymes [BR:
scau01007
]
Aminoacyl-tRNA synthetase
Class II (U)
119965793 (fars2)
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119965793 (fars2)
Prokaryotic type
119965793 (fars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
119965793
NCBI-ProteinID:
XP_038652563
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All DBs
Position
5:complement(15351465..15893180)
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AA seq
476 aa
AA seq
DB search
MMKSAFGNLPREKYCCICMKVRLTIMRIPCKFFSYLRFQKVSRSLQLQPGDAGGNIKQFR
NIXTRPISRATLSDSIELFEKFYLRDDYTNVTPKILSKVGKSLQNQKNHPLWLIKERIKD
HFYTHYLSRNRNPIFSVYDNLSPVVTTEQNFDSLLIPPDHASRXKGDNFYLNQTNMLRAH
TSAHQHELIRAGLNAFXVVGDVYRRDEIDCSHYPVFHQMEGVRLFSKHELFANVQNGEEL
CIFEKGCHTPYKQEMHTLEAVKLLEFDLKQTLKKVMTHLFGKGLEIRWVDCYFPFTHPSF
EMEIKFQGEWMEVLGCGIMEQQLVNSAGAQDRIGYAFGLGLERLAMILYAIPDIRLFWSE
DERFSKQFQVTHIDQKVTFQPLSKYPPLVNDISFWIPKEGYEKNDFYDLVRNIGGDLVEK
VSLIDHFTHPKTEKVSHCYRITYRHMERTLTQEEVRTIHQAIEEMTVEKMGVEGRF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagtgcatttggtaacttgccgagagagaaatactgctgcatttgtatgaag
gttcgattgacaataatgaggataccttgtaaattcttctcgtatctacggtttcaaaag
gtttcacgttctctacagttacaaccaggagatgctggtggaaacataaagcagttcaga
aacatanncaccaggcccatcagcagggcaacactttctgactcgattgaactctttgag
aaattctaccttcgagatgactatacaaatgttacgccgaagattttgtcgaaagtgggg
aaaagcttacagaaccaaaaaaaccaccctttatggctcattaaggaacgcattaaggat
catttctacacgcattatttgagtcgcaataggaatccaatattttcagtgtatgataat
ctgtcccctgtggttactacagagcagaactttgacagtttacttataccaccggatcac
gcaagcaggnagaaaggggataacttctatctgaatcaaactaacatgctccgggctcac
acatctgctcaccagcatgaactcattcgtgcaggtcttaatgccttcntggtagttgga
gatgtctaccgacgagatgagattgactgcagccactatccagtcttccatcaaatggag
ggtgtgagactattttcaaagcatgagttgtttgctaatgtacaaaatggcgaagagctt
tgcatctttgagaagggatgccacacaccctataaacaagagatgcacacactggaggca
gttaaactactagagtttgatttaaagcagaccctgaagaaagtcatgacgcacctcttt
gggaaaggattagaaattagatgggtggattgctatttcccatttacacacccttccttt
gaaatggagatcaaattccaaggagaatggatggaggtccttggctgtgggatcatggag
cagcagctggtaaactcagctggtgctcaagacaggattggatatgcttttggcctgggg
ctagaacggctagcgatgattttgtatgcaataccagacatccgtttgttctggagtgaa
gacgaacgattctccaaacaattccaggttacccatattgaccagaaagtcacgtttcag
cccctgagcaaatacccaccattagtaaacgacatctccttttggattccaaaagaagga
tatgaaaaaaatgatttctacgatttggtgcgaaatatcggtggtgacctggttgagaag
gtcagcctcattgaccatttcacacatccaaagactgaaaaggtcagccactgctacagg
attacctaccgccacatggaaagaacattaacccaggaagaggtgcggaccattcatcaa
gcaattgaagaaatgaccgtggagaaaatgggagtagaaggcagattttaa
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