Scyliorhinus canicula (smaller spotted catshark): 119965874
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Entry
119965874 CDS
T11175
Symbol
pigm
Name
(RefSeq) GPI mannosyltransferase 1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
scau01100
Metabolic pathways
Module
scau_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
119965874 (pigm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scau01003
]
119965874 (pigm)
Glycosyltransferases [BR:
scau01003
]
GPI-anchor biosynthesis
Core oligosaccharide
119965874 (pigm)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
GT87
Motif
Other DBs
NCBI-GeneID:
119965874
NCBI-ProteinID:
XP_038652749
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Position
5:28237296..28250716
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AA seq
448 aa
AA seq
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MSRCKLPAVKGEVAPPPPPLSLSMGPAPSPGLAGLLAAALCLRLGLVFYGLHQDRSMLVK
YTDVDYHVFTDAARFVTQGASPYKRATYRYTPLLAWMLTPNIYLTELYGKFLFVILDVFA
AYLMHRILCLRGLDSRRASWYCSLWLFNPLPMTVSSRGNAEAVLAVLVLATLHCLESRQI
VKAAFFYGLSVHMKIYPVTYAVPIILSLQTDQQATGNDTPTAWTKGTLKDTGFHGYVRAF
LKLIVRLLNRDVLLFVGIAGLLFLGLGVLFYCSYGWEFLEHTYLYHLTRKDIRHNFSPYF
YMLYLTAESEWSSALALAAFLPQFLLLFITSFAYHKDLTFCCFLHTAIFVTFNKVCTSQY
FLWYLCLLPVVLPYLTLTWRRGMVLLVLWFIGQGLWLTPAYYLEFEGHNTFLFIWMAGLV
FLSINCFILLVLISNYKKRELQSKRKTK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagccgatgtaaacttccagcagttaaaggcgaggtggcgccgccgccgccgccgctc
tccctctcaatgggcccggctcccagtcccgggctcgcgggtctccttgcagccgctctc
tgcctccgcctcggcctggtcttttacgggctgcaccaggaccgctccatgctggttaag
tacacggatgtggactaccatgtcttcacggacgccgccaggttcgtcactcagggagct
tctccatacaaaagagcaacctatcgttacactccattactggcatggatgttaactccc
aacatttacctcacggaactgtatggaaaattcctctttgttatacttgacgtctttgca
gcttacctcatgcacaggatcttatgtcttcgaggactggacagccgcagagcaagctgg
tattgcagcctatggcttttcaaccctttgccaatgaccgtctcaagcagagggaatgca
gaagctgttcttgcagtgttggtgctggctactttgcactgcctagagagcagacagatt
gtgaaggctgccttcttttacgggctttctgtacatatgaaaatttacccagtgacctat
gcagtccccataatcttatctcttcagactgaccaacaagcaacagggaatgatactcct
actgcatggactaaaggcacccttaaagacactggtttccatggttatgtgagggctttc
ctgaagctgattgtcagactgctgaacagggatgtgctgctatttgttggtattgctgga
ctgttattcctcggccttggggttcttttctattgcagttatggctgggaatttctggag
cacacatacctttaccacttaacgcggaaagacattcgccacaacttctcgccctatttc
tacatgttgtatttgactgcagagagtgagtggagctctgctctggcactagctgctttc
ctcccacagttcctgctgctcttcatcacgtcatttgcttatcacaaggacctgaccttt
tgctgcttcctgcacactgctatttttgtcactttcaacaaagtgtgcacttcacagtac
ttcctgtggtatttgtgtctgctaccagtggttcttccatatctgacacttacttggaga
agaggcatggtgctgctagttttgtggttcatcggtcaggggttatggctcactcctgca
tattatctggagtttgaaggacacaacacctttctgttcatttggatggctggattggta
tttctttccatcaactgcttcattctgttggtattgatctcaaactataagaaaagagaa
ttgcagtcaaaaagaaagaccaaataa
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