Scyliorhinus canicula (smaller spotted catshark): 119965897
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Entry
119965897 CDS
T11175
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scau03041
]
119965897
Spliceosome [BR:
scau03041
]
Complex C
Other components
hnRNP proteins
119965897
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
hnRNP_Q_AcD
RRM_7
RRM_5
RBD_RDR6
RRM_occluded
Calcipressin
DUF1866
Motif
Other DBs
NCBI-GeneID:
119965897
NCBI-ProteinID:
XP_038652805
LinkDB
All DBs
Position
1:complement(105952149..105992615)
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AA seq
634 aa
AA seq
DB search
MATEVNGNAAQVKEEEEPMDTSSAVTHSEHYQVLIDAGLPQKVAERLDDIFQTGLVSYAD
LDERAIDALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREKQGSKVQDAT
KGPDESKIKALLERTGYTLDVTTGQRKYGGPPPDSVHSGPQPGIGTEVFVGKIPRDLYEN
ELVPLFEKAGSIWDLRLMMDPLSGQNRGYAFVTFCNKDAAQEAVKLCDNYEIRPGKHIGV
CISVANNRLFVGSIPKNKTKENIMEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEFEDH
KSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKVKVLFVRNLASSVTEEILEK
TFSQFGKLERVKKLKDYAFVHFEDRDAAVKAMDQMNGREIEGESIEIVLAKPPDKKKKER
QAQRQATRTQVYEDYYYYPPPRMPPPIRGRVRGNRGGSYGYPPDYYGYEDYYDDYYGYDY
HDYRGGYEDPYYGYDDGYPVQRGRGGRGGRGAVPPPRGRGVPPPRGRAGYPQRGAPMGPP
RGARGGRGGPQPPQRGRGARGGRGNRGGNVGGKRKADGYNQPDSKRRQTNNQQNWGSQPI
AQQPLQQGGDYSGNYGYNNDNQEFYQDTYGQQWK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaggtgaatggaaatgcagcgcaggtgaaggaggaggaagaacccatggat
acctcatctgctgtcacccattcagaacactaccaggtgctaatagatgctggcttgcca
cagaaagtagcagaaaggctagatgatatctttcaaacagggttagtatcttatgctgat
cttgatgagagagccattgatgccctcagagagttcaatgaagaaggagcactgtccgta
ttgcaacagtttaaggaaagcgacctatcacacgtgcagaataaaagtgcctttctgtgt
ggcgtaatgaagacctatagacagcgggagaaacaaggtagcaaagtacaagatgctaca
aagggtccagatgagtcaaaaattaaggcactgttggaacggacaggctacactttggat
gtaactacaggacaaaggaagtatggtggtcctcctcctgacagtgtgcattcaggccca
cagcctggaatcggaacagaggtattcgttggaaagatacccagggatttgtatgaaaat
gaacttgttcccttgtttgaaaaagctggttctatctgggatctgcgactaatgatggac
cctctgtctggtcagaaccgtggctatgcttttgtgactttctgcaacaaggatgcagca
caagaggctgtcaaactgtgtgacaactatgaaatccgtcctggtaagcacattggagtt
tgcatttctgtggccaacaataggctgtttgttggctctattccaaagaacaagaccaag
gaaaacataatggaagaattcagcaaagtcacagagggtcttactgatgttatcctctat
catcagcctgatgataagaagaaaaacagaggattctgtttcctagaatttgaggatcac
aaatctgctgctcaggccagacgaagattaatgagtggcaaagtcaaagtctggggaaac
gtagtcactgtggaatgggcagacccagtagaggagccagatcctgaggttatggcaaag
gtcaaagtgctgtttgtaagaaacttggccagctctgtaacagaagaaatactagaaaag
acttttagtcagtttggaaaactggaacgggtgaaaaagctgaaagattatgcttttgtt
cattttgaagaccgagatgcagcagtcaaggcaatggatcaaatgaatggaagagaaatt
gaaggtgaaagcattgaaatagttcttgcaaagccacctgacaagaaaaagaaggaacgt
caggcacaaagacaggcaacacgaactcaagtgtatgaagattattattattacccccca
ccccgtatgccacctccaatcagaggcagagtccgtggaaatagaggtggtagttatggc
tatcccccagattattatggctatgaagattactatgatgattactatggttatgattat
catgattatcgtggtggatatgaagatccatactacggttatgatgatggatacccagtc
cagagaggaagaggtggaaggggcggtagaggtgcagttccccctcctagaggtcgtggt
gtgccaccaccccgaggaagggcaggatatcctcaacgtggagcaccaatgggacctcca
agaggtgctaggggtggtagaggaggtccgcagccgccgcaaagaggacgtggagcccgt
ggtggcaggggtaaccgtggtggtaacgttggaggaaagcgaaaagctgatgggtacaac
cagccagattccaagcgacgccaaaccaacaaccaacagaactggggctcccaacccatc
gctcagcagcctctgcagcaaggtggtgattattctggtaactatggttacaataatgac
aaccaggagttttatcaggatacttatgggcagcaatggaaataa
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