Scyliorhinus canicula (smaller spotted catshark): 119965968
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Entry
119965968 CDS
T11175
Name
(RefSeq) F-actin-uncapping protein LRRC16A-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119965968
Membrane trafficking [BR:
scau04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
119965968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
IL34
Motif
Other DBs
NCBI-GeneID:
119965968
NCBI-ProteinID:
XP_038652944
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All DBs
Position
5:complement(48509727..48968358)
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AA seq
1473 aa
AA seq
DB search
MTEDVSEVPKELLESVRDVIGRKIKIILKKKVKLEVKGDKVENKVLVLTSCRVFLLAARI
PTKLELTFNYLEIQGINCCKPAQLIVETDRCTFPLKLTSSEEVNEVVGNLGSCLKKMLPG
VSPMRVMKKVTMEPSDRLSTLQALWDNQNIAEPGPCGGFSQMYACVCDWLGLPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVARSTRLEELVLENGGLRTDFAQKLASALAHNPNSRLHTINLANNPLEDRGMFSLSNQF
AKIPKGLKHLNMSKTSLSPKGVNILAQSLSANQQIPNSLTHLDLSGNFLRGDDLSNLYSF
LAQPNALVHLDLSNTDCALDMVCAALLRGCCQELATLHLAKSIFSHRKGKEVPPSFKLFF
SSSLALRHINLSGTKLPPDAVKALLLGLSCNPQLKDVSLDLSNCELGHCLRSGGAQILEG
CIAEIHNISKLDISDNGLDSDLATLVIWMSKNRSIRHLALGKNFNNIKSKNLAPVLDNIV
QMIQDEESPLESLSLADSKLKTELTIIINALGSNSSLTKVDISGNGMGDIGAKMLGKALQ
INTKLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPVNDASQALKANPERTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRMCVKVQDHLNSLRYSGADTVQED
VRLAENFMRDAKNSKTLLPRLYHLRGDSWAAGISSSSNPIQEKLESMAGEVTRVVDEQLK
TMLESMVDAAEGLCPHVMRKAHLRQNLIEASTEKVSIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDHIVDEILEALSSSQHKLANHLTKHGKPLPRQESTEIEVLEEKPTKRLTV
TTEELSELERLEELDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEIP
VHFDDSAPASSNYSKQERSSRPSSMMNELPSEEVKKLEHYTKSRPKRNKKLPPSKTALSA
AESQEGEQNGLMSRIDEGVDEFFTKKVTRMESKRLSLRSAESLDSSDSEDKKRKDSKKTS
FLNLIKSRSSKTERPQTVIVPEEPSSPKGIIKSPAPDLTKRESKQMEQNGSTEHSEEHKT
PDSVDAVFDDTGKAEKLDSKSSPQGGRWYGVQVMGSGLLAEFKAKQEKRAAVQKKLENEA
GSKELNENVSNAADRLDETGRAKGQQTQKGDPSLISPEKLTKPEPKTETVKSKSSSTTPT
SPKTPPQILKPSNVGRPSIPQKPRPSWSTDESPESSSGHTSPKIALVPPALRRMPSDKDG
QSSPPFSGPSSWSSSHEELFGLDSRADTEHDSEMAKNGARVKRTLRQSSTGAVNDASEIE
RKKSQPITGQNFCLPGVVVGEVGTIRQSSMSETSSRQSPRSEESKPGRFAEDQESRGKEK
ISKRERQHSKTEGKNGSKSSDSGEEGDKDYIFV
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacgtttccgaggttcccaaagagctgctagagagcgtcagggatgttatt
gggagaaagattaaaatcattttgaagaagaaggtgaaactcgaagtcaaaggagacaag
gtggaaaataaagttttggtgctgacatcatgccgcgtttttcttttggcagcacgaatc
cctaccaagttggaactcactttcaactatctggagattcaaggaataaattgctgtaag
cctgcacagttgattgtggaaactgatcgatgcacttttcctctgaaactaacttcatca
gaagaggtgaatgaagtggtggggaacttgggatcatgcctaaagaagatgctccctggt
gtctctccaatgagggtaatgaaaaaggtgacaatggaaccgtcagatcgactgtcaact
ctgcaggcattatgggataaccagaacattgcagagccaggaccttgtggtggtttctct
cagatgtatgcatgtgtttgtgactggcttggattgccatatagggaggaagtgcaatgg
gatgtggatacaatttaccttacgcaagataccagggaactgaacttgcaagacttcagc
caccttgaccacagagacttgataccaattgttgctgcgttggagtacaaccaatggttc
acaaagctctcctctaaggatcttaaactgtccacagatgtttgcgaacaaattctgcga
gttgttgctagatccacacgtttggaagagctggtgctcgaaaatggagggctccgaact
gattttgcacagaagttggccagtgcccttgctcacaatccaaactcaagacttcacaca
attaatcttgccaataatccactggaggacagaggcatgttctctctgagcaaccaattt
gccaaaattccaaagggattgaaacatttaaacatgtctaaaacctccttgtcacctaaa
ggagtgaacatccttgcccaatcactgagtgccaatcaacaaattcctaactcgctcaca
caccttgacctctcagggaacttcctccgaggagatgacctatcgaacttgtacagtttt
ctggctcagccaaacgctcttgtccatcttgatttgtcgaacactgactgtgctttagat
atggtgtgtgcagcacttctacggggctgttgtcaagagctggcaactcttcatctggct
aagagcatcttctcacacaggaaaggaaaggaagtccctccatccttcaaactgtttttt
agcagttcactggctttgagacacatcaacctgtcaggcacgaaactccctccggatgca
gtcaaagcacttttacttggcctttcttgcaatcctcaactaaaagatgtttctcttgat
cttagcaattgtgagcttggtcactgtctaaggtcaggtggggctcagattttagaaggc
tgcattgcagaaatccataacatttcaaaactggatatttcagacaatggtttagattcc
gatcttgctactcttgtaatatggatgagcaagaacaggtcgattcgccatcttgccttg
ggcaaaaacttcaacaacataaagtccaagaaccttgcacctgtgcttgataacattgtc
caaatgattcaggacgaagaatcaccactagagtcattgtcactagcagattcaaagctt
aagacagaattaacaataataattaatgctttgggaagcaattcttccttgactaaagtg
gacatcagtgggaatggaatgggagatatcggtgcgaagatgctgggaaaggccctacaa
atcaacacgaagctcaggaccgtaatttgggacaagaataacataactgcacagggcttt
caggatattgctgtggctttggaaaagaactatactctaaggtttatgcctattcctgtc
aatgatgcctcacaagcattgaaggccaatccagaaagaacagaggaagcactgcaaaag
attgagaactatctgctgcgaaatcatgaaaccaggaagtatctgcaggaacaggcctac
aggttacaacagggcattgtgaccagcaccacacagcagatgattgacaggatgtgtgtg
aaagtacaggatcacctcaactcgttgaggtattcaggtgcagatactgttcaagaggac
gtgcgactagctgaaaactttatgagagatgccaaaaactccaaaacgctgttgccacgt
ctttatcatctgcgaggagattcttgggcagcaggaatcagtagttcatcaaatcccatt
caggaaaaactggaatccatggctggagaggtgactcgggtcgtagatgaacagctcaag
actatgctggaatccatggtggatgcagccgagggactgtgccctcacgtgatgagaaaa
gctcacctgcgccagaatttaatagaggccagcacggagaaagtttccatccctcggaca
tttgtcaagaatgttctacttgagcaatcgggcatcgatattctgaataaaattagtgag
gtcaagctgactgtggcatcgtttctgtctgaccatattgtagatgaaattttagaagca
ctttccagctcacaacacaaactggcaaaccatttgacaaagcatggaaagccactacca
cggcaggaatccacagaaatagaagtgttggaagagaagccaacaaagcgacttactgtt
actactgaggaactgtccgaattagagaggctggaagaacttgatacctgcatgactctc
tgctgtaccagtatgactcccaagtcgaagaggaaaagtatccacagcagaatgcttcgt
cctgtttccagggcctttgagatggagtttgacctggataaggctcttgaggagatccca
gtccattttgatgattcagctcctgcttcaagtaattacagcaagcaagaaaggtcatca
cggcctagcagtatgatgaatgaactaccctcagaagaggtaaagaaactggagcattat
acaaagtctagacccaagaggaacaaaaaattaccaccaagcaagacggctctttccgca
gccgagtcccaggagggtgaacagaatggccttatgagcagaattgatgagggagtggat
gaattttttaccaagaaggtaacacgaatggagtcaaagagattgtcactaaggagcgca
gagtcgctagattccagtgactcagaagacaaaaagaggaaggactccaaaaaaactagt
ttcctaaatttaattaaatctcggtccagcaaaactgaacggccacagaccgtgattgtc
ccggaagagccatcatctcccaagggaattatcaaaagtccggccccagacctaacgaag
agagaatccaagcagatggaacaaaatggcagcacagaacactccgaggagcacaaaaca
ccagattctgtggatgctgtgtttgatgatacagggaaggcagagaagttggacagcaag
agtagcccacaaggtggccgttggtatggagtccaagttatgggcagtggactactggca
gagtttaaagctaagcaagagaaacgggctgctgtgcaaaagaaactggaaaatgaagct
ggaagcaaggagttgaatgaaaatgtgtcaaatgcagcagaccgactggatgaaactggt
agagccaagggccagcaaacccaaaaaggagatcccagcttgatttcaccagagaaactt
actaaacctgaaccaaagactgaaacagtgaaatcaaaaagttcctctaccactcctacc
agtccaaaaacaccacctcaaattctcaagcccagcaatgtgggacgtccgagtattcct
cagaaacctaggcccagctggagcacagacgaaagtccagagtcatcatccggtcacact
tcccccaaaattgctctggtcccacctgctctaaggcgaatgccatcggataaagatgga
caaagcagtcctcctttcagtgggcccagcagctggtcatcttcacatgaagagctattt
ggacttgatagtagagctgacacagaacatgattctgaaatggcaaaaaatggagcacgt
gtcaaaagaacactgaggcaatcatcaactggtgcagtgaatgatgcaagcgagattgag
cgcaagaaatcacagccaataactggtcagaatttttgccttcctggagtggtggtgggt
gaagttggcaccatacgccaaagttccatgtcggaaacgagttccaggcaaagcccgcgc
tccgaagagagcaaaccaggccgattcgctgaggatcaggagtcacgagggaaggagaaa
atatccaagagggagcggcagcattcgaaaacggaggggaagaatggcagcaagtccagc
gattctggagaggaaggagacaaagactacatatttgtatag
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