Scyliorhinus canicula (smaller spotted catshark): 119966002
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Entry
119966002 CDS
T11175
Symbol
edn1
Name
(RefSeq) endothelin-1
KO
K16366
endothelin-1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04270
Vascular smooth muscle contraction
scau04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119966002 (edn1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
119966002 (edn1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
119966002 (edn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119966002 (edn1)
Cytokines and neuropeptides [BR:
scau04052
]
Neuropeptides
GPCR binding
119966002 (edn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endothelin
Motif
Other DBs
NCBI-GeneID:
119966002
NCBI-ProteinID:
XP_038653042
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All DBs
Position
5:56244177..56257529
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AA seq
223 aa
AA seq
DB search
MEFNVLCSLLPLIWELHFSTGSPLSAAAVTVSPIFSAGQTSSPVPRRLSRSKRCSCSSFL
DKECIYFCHLDIIWINTPERIVPYGLGNSPRVRRSVKKNLATPEELKPRCQCRSQEDTVC
WQFCGDGQQTSRFSTKTKVQKNYLAEASDRMSRNKQDCKGLECVYQHLLNIAKKLEPADS
NHLPTSVKWIYTIRKVRQDNYNKLKRLPVSMTGPVAECRDCKR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaacgtgttatgttccttgctccctctgatttgggaactgcacttttccaca
ggctcccccctatcggctgcagcagtgaccgtctctcccatcttctctgccggtcaaact
tccagcccggttccccggcggctcagccgctccaagcgctgttcctgttcctcattcctg
gacaaggaatgcatctacttctgccacttggacatcatctggatcaacacacccgagagg
attgtcccgtacggactgggcaattccccccgggtcagacggtctgtgaagaaaaacctg
gcgacgcccgaggaattgaagccacgatgtcagtgccgcagccaagaggacactgtgtgc
tggcaattctgtggtgatggacaacaaacatcgagattttcaaccaagaccaaagtacaa
aagaactacctggcagaagcatcagacaggatgagtcgaaacaaacaggactgcaaggga
ttggaatgtgtttatcaacacctccttaacattgcaaaaaagttggagcctgcagacagt
aaccatttacctacatcagtgaaatggatatatacaataaggaaagtgagacaagacaac
tacaataaactgaaaagattaccagtttccatgacaggccctgtggcagaatgcagggac
tgcaagcgctga
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