Scyliorhinus canicula (smaller spotted catshark): 119966108
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Entry
119966108 CDS
T11175
Name
(RefSeq) DNA topoisomerase 2-beta-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scau03032
]
119966108
03036 Chromosome and associated proteins [BR:
scau03036
]
119966108
Enzymes [BR:
scau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
119966108
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Topoisomerases
119966108
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
119966108
Centrosome formation proteins
Centriole proteins
119966108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
119966108
NCBI-ProteinID:
XP_038653258
LinkDB
All DBs
Position
5:86751690..86972956
Genome browser
AA seq
1658 aa
AA seq
DB search
MMSKGDGESGGLTWVTLFSNQKNLANKEEINAKSDTSKKTSEASKKMSVERVYQKKTQLE
HILLRPDSYIGSVEPVTQSMWVYDEDVGMNLRDVTFVPGLYKIFDEILVNAADNKQRDKN
MTCIKISIDVDSNIISIWNNGKGIPVVEHKVEKVFVPALIFGQLLTSSNYDDDEKKVTGG
RNGYGAKLCNIFSTKFTVETACKEYKNSFKQTWTNNMNKSSDPKIKYFDGDDYTCITFQP
DLSKFKMEKLDKDIVALLTRRAYDVAGSCKGVKVMFNGKKLPINGFRSYVDLYVKDKLDE
TGVALKVVHESVHDRWEVCLTMSEKGFQQISFVNSIATTKGGRHADYVVDQIVSKLIEVV
KKKNKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQTKENMTLQPKNFGSKCVLSERFFKA
ANNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGRHSSDCTLILTE
GDSAKSLAVSGLAVIGRDRYGVFPLRGKILNVREASHKQIMENAEINSIIKIVGLQYKKS
YDDAESLKSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLRHQFLEEFITPIVKAT
KNKQELAFYSIPEFDEWKKQMENNKSWKVKYYKGLGTSTSKEAKEYFADMDRHRVMFRYT
GPEDDAAITLAFSKKKVDDRKEWLTNFMEDRRQRRLHGLPEQYLYGAATKYLTYNDFINK
ELILFSNSDNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLAGSVAEMSAYHHGE
QALMMTIVNLAQDFVGSNNISLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLSPQV
DDNLLKFLYDDNQRVEPEWYCPIIPMVLVNGAEGIGTGWACRIPNYDTRELVNNVRRMLD
GLDPLPMLPSYKNFKGTIHEVGQNQYVVSGEILVLDRNTIEITELPVRTWTQAYKEQVLE
PMLNGTEKTPALINDYKEYHTDASVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMV
LFDHMGCLKKYETVHDILKEFFDLRSHYYHLRKEWLAGMLGAESAKLNNQARFILEKIQG
KVSIENKSKRDLYQMLVQRGYESDPIKGWKEAQEKTATEEDLLEVDDGTSSILGAGSGPD
FNYILNMPLWSLTKEKVDELLKQRDTKGKELDDLKRKSASDLWKDDLAAFIEELDRVEAQ
EREDLLAGSLGKAVKGKVGKPKIKKMLLEETLPSVHGRRIVPVISLAMKAEATRKMIKKK
GKGDTDAIKQEFDEDVGTAIGEGNGEEVSNTSEPKVKTPRLKKEKKEPGARARKTPLSSK
SNVKKGKKKNPWSDSESKSDDDLEEPDLTFIPREITPRRAAAEKPKYTFDFSEEEADDDE
DLKMKSESPSIEERDAEFVPSDGGGKDEDDEFFSIKSKQSPLHAGKVTPQSTKNHEPESI
FSAPSYHENTEETDILKSDSDEDSSPAFSTLSSIKSSHKTPAKSQAPTPAKKAAKKTPST
DGTPKPKRPPKPKKSEHVDSDSDFGCGMPKKATPAKRKQLPKPKKAEFIDSDSESDLGFG
MSKKSGAAKGKSRGKKRKQSGSEDDEYSPVKKPNKSSASKKSKKSIYDEEDGENDFETAD
DVRSTHPDASQSRLGRAKKEVKYFIESDEDDYDDDIYD
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccaagggagacggagagtctggaggtttgacctgggtgacattgttcagcaat
cagaaaaaccttgcaaacaaagaagaaataaatgctaaaagtgacacttcaaaaaagacg
tcagaagcttccaagaagatgtctgtggaaagagtttatcagaagaaaactcagctggaa
catatcctcctccgccctgactcgtacattggctctgtggaacctgtaacccagtcaatg
tgggtatatgatgaagatgtgggcatgaacctgagggatgtcacttttgttccaggcttg
tacaaaatatttgatgagattcttgttaatgcagctgataacaagcagagggacaagaat
atgacatgtatcaaaatttcgattgatgtggattccaacatcatcagtatttggaacaat
gggaaaggcattccagtagtggagcacaaagtagaaaaagtgtttgtacctgctttgatt
tttgggcagctcttaacttcaagtaactatgatgatgatgaaaagaaagtcacaggtgga
agaaatggctatggtgctaaactctgcaatatatttagtaccaagtttacagttgaaaca
gcctgcaaggagtacaaaaacagttttaagcagacatggacaaataatatgaacaaatca
tctgatccgaagataaagtactttgatggtgatgattatacatgtattacattccaacct
gatctgtcaaaattcaagatggaaaaactagataaagatatagtggcactcttaacacga
agagcttatgatgtagctgggtcgtgtaagggagtcaaagtcatgttcaatggaaagaaa
ctgccaataaatgggttccggagctatgttgatctttatgtgaaagataagttggatgaa
actggcgtagcactaaaggtggttcatgaatctgtgcatgatcgttgggaagtgtgcctg
accatgagtgagaaaggcttccagcaaatcagctttgtaaatagcattgctactacgaag
ggtggtagacatgctgattatgtagttgatcagattgttagtaaactgattgaagttgta
aaaaagaagaacaaagctggtgtatcagtgaaaccttttcaggtaaaaaatcatatatgg
gtctttgtcaactgcctgattgaaaacccaacatttgattctcaaacaaaagaaaacatg
actcttcaaccaaagaactttggctccaagtgtgtcctttctgagaggttcttcaaagca
gcaaacaactgtggcattgttgaaagtatactaaattgggtcaaatttaaagcccagact
caattgaacaagaagtgttcctctgtaaaacacagcaaaatcaaaggcattccaaaactg
gatgatgccaatgatgcaggtggaagacattcttcagactgtacattgattctgactgaa
ggagattcagccaaatccttggctgtgtcaggtctggctgttattgggcgtgacagatat
ggtgtgttcccattgaggggtaaaattctcaatgttcgagaagcttcacacaaacagata
atggagaatgcagagatcaacagcattatcaagatagttggtctgcagtacaagaaaagt
tacgatgatgcagagtctctgaaatctcttcgctatggcaagattatgatcatgactgat
caggatcaggatggctctcacatcaaaggcttgctgattaacttctttcatcataactgg
ccatctcttctgagacatcaattcttggaggaattcattacacctattgtaaaggctacc
aaaaataaacaagaattggcattctacagcattcctgaatttgatgaatggaaaaagcaa
atggaaaacaacaaatcttggaaagtgaaatattacaaaggtctcggtaccagtacatca
aaagaagcaaaagaatactttgctgatatggatagacatcgcgtaatgtttagatacact
ggcccggaggacgatgcggcaattaccctggctttcagcaaaaagaaggtagacgatcga
aaagaatggctgaccaatttcatggaagacagaagacagagacggctacatgggttgcca
gagcaatatttatatggagcagcaacaaagtacttgacatacaatgacttcatcaacaag
gaattaatccttttctcaaattctgacaatgaaaggtccattccttctcttgttgacggt
ttaaaaccagggcaacgcaaagttatgtttacatgtttcaagcggaatgacaaacgagaa
gttaaggttgctcagttggcaggatcagtggctgaaatgtcagcttatcaccacggtgag
caagcacttatgatgaccatcgtaaacttggctcaagactttgtaggaagtaacaatata
agtttgttgcagccaattggtcagtttggtaccagactgcatggtggcaaagatgctgct
agcccacgttatattttcacaatgttaagtccattggcacgtttgctttcccctcaagtg
gatgacaatttattgaagtttctttatgatgacaaccagcgagtcgagccagagtggtac
tgccccataattcccatggttctcgttaatggagctgaaggtattggcactggatgggct
tgtagaattcctaattatgatacccgggagctggtcaacaatgtcaggcgaatgctcgat
ggtctggatcccctacctatgcttccaagctacaagaatttcaaaggaacgattcatgaa
gtaggccaaaaccaatatgttgttagtggtgagatcttggtattggatcggaatacaata
gaaattacagaacttccagtaaggacttggacacaggcatacaaagaacaagttcttgaa
cctatgctcaatgggacagaaaagacaccagctttgataaatgactacaaagagtatcat
actgatgcttcagtcaaatttgtggtaaaaatgtcagaggagaaacttgcacaagcagaa
gctgctggtctacacaaagtgttcaaactgcaaaccactctcacttgcaattctatggta
ttatttgatcatatgggttgcttgaagaagtatgaaactgtacacgacatcttgaaggag
ttctttgatttgcggtcacattattaccatctgaggaaagaatggttggcaggaatgctt
ggagcagagtctgcaaagctaaacaaccaagctcggttcattctggaaaaaatacaagga
aaggtttcaattgagaataaatcgaagagggatctttatcaaatgcttgttcagcggggc
tatgaatccgatccgatcaaaggctggaaagaagctcaagagaagacagcaacagaagaa
gatttgttggaagtagatgacggcacttcaagtattttgggtgcaggatctgggccagac
ttcaattacatcttgaacatgcctctttggtctcttacaaaggagaaagtagatgaacta
ctaaagcagagggatacaaaaggaaaggaacttgatgatctgaagagaaagagtgcttct
gatctctggaaagatgaccttgctgcctttattgaagaacttgatcgtgtggaagcccaa
gagagagaggatcttcttgcaggatcacttggtaaggcagttaagggcaaggttggtaaa
ccgaaaataaagaagatgctgcttgaagaaactctgccatcagtccatggtaggagaatt
gtaccagtcattagtcttgctatgaaggcagaagccacaagaaagatgatcaagaagaaa
ggaaagggtgatacagatgcaataaaacaggagtttgatgaagacgttgggacagccata
ggagaaggaaatggagaagaagtatcgaacacaagtgaacccaaagtcaaaactccacga
ctgaagaaagaaaaaaaggaacctggtgccagagcaaggaaaacaccactgagttccaaa
tccaatgtcaagaaaggaaagaagaagaatccctggtctgattcagaatccaagtcggat
gatgacctagaagaacctgatttaacatttattccaagagaaattacgcctcgtagggct
gcagctgaaaagccgaagtatacatttgacttttctgaagaggaagcagatgatgatgaa
gatttgaagatgaaatctgaatctccaagtatagaagaaagggatgctgaatttgttcct
tcagatggtggtgggaaggatgaagatgatgagttcttctccatcaaatcaaagcaatca
ccattgcatgctggaaaggttactccacagtctacaaaaaaccacgaaccagaaagtata
ttctctgcgccgtcatatcatgagaacacagaagaaacagatatcttaaaatcagatagt
gatgaagattcctccccagcattttcaactctcagcagtatcaagagctcgcataagact
cctgccaaatcacaggcaccaacacctgctaagaaggctgcaaaaaaaacacccagcact
gatggtacacccaagccgaagcgaccacctaaaccaaagaaatcagagcatgttgattct
gactctgattttggctgtggaatgccaaaaaaggcaacacctgcaaagcggaagcagttg
cctaaacctaagaaagcagaatttattgactctgattccgaatcagacttgggctttgga
atgtcaaagaaatcaggagcagcaaaaggtaaaagccgaggaaagaagagaaaacaatct
ggctctgaagatgatgaatattctcctgtgaagaagcctaataaatcatcagcaagcaag
aaatctaaaaaatcaatatacgatgaagaagatggtgaaaatgattttgagacagctgac
gatgttcgaagcacacatcctgatgcatctcaatccaggctgggccgagctaagaaagag
gtgaaatattttatagaatcagatgaagatgactatgacgatgatatctatgattaa
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integrated database retrieval system
