Scyliorhinus canicula (smaller spotted catshark): 119966112
Help
Entry
119966112 CDS
T11175
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119966112
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
scau03310
]
119966112
Transcription factors [BR:
scau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119966112
Nuclear receptors [BR:
scau03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
119966112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119966112
NCBI-ProteinID:
XP_038653262
LinkDB
All DBs
Position
5:complement(87044960..87324511)
Genome browser
AA seq
489 aa
AA seq
DB search
MFDCMDVLAVSPGQMLDFYTPSPSSCMLQEKALTACFNGLTHRDWQQRHSTQSIETQSTS
SEEIVPSPPSPIPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRE
KNCVINKVTRNRCQYCRLQKCFEVGMSKESSRQQGADDVTSQCRKGGSERSFGRGLLLPT
VRNDRNKKKKEMPKQECSESYTMTAELEDLIEKICKAHQETFPSLCQLGKYTTNSSADHR
VRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRY
TPEQDTMTFSDGLTLNRIQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICG
DRQDLEDAEKVDKLQEPLLEALKIYIRKRRPNKPHMFPKILMKITDLRSISAKGAERVIT
LKLEIPGSMPPLIQEMLENSEGHDPLAPSANTSTGSTGSSSQALEATSSPSLSPSSAANG
PNSQVPNTQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgttctcgcagtcagccctgggcaaatgctggatttctacact
ccgagcccgtcctcttgcatgctgcaggagaaagctctgactgcatgcttcaatggactg
acacacagggactggcaacagaggcacagcactcaatcaattgaaacacagagtaccagt
tctgaagagattgtaccaagcccaccatccccaattccacctccacgggtatacaaacct
tgctttgtctgtcaggacaagtcatcaggctatcactatggagtcagtgcctgtgaagga
tgcaagggtttcttccggagaagcatccagaaaaatatggtttatacttgtcacagagaa
aaaaactgtgtcatcaacaaagttactagaaatcgctgccagtactgccgattgcagaag
tgctttgaagtgggcatgtctaaagaatcaagcagacagcagggagctgacgatgtgacg
tcacaatgccgcaaaggaggttctgaaaggagttttggcagaggcctgctgcttccaact
gtaagaaatgacagaaacaaaaagaaaaaggagatgccaaagcaagaatgttcagaaagc
tacacaatgacagcagaattagaggatctaattgaaaagatttgcaaagctcaccaggaa
accttcccttctctttgccagcttgggaaatatactacaaattccagtgctgaccaccgg
gtacggcttgacctgggcttgtgggacaaattcagtgaacttgccacaaagtgcattatc
aaaattgtggaatttgcgaaacgactgcctggcttcacgagcttgaccattgcagatcag
atcactctgctcaaagctgcttgcctggacatcttgattctccgaatctgcacccgatac
acacctgagcaagacacaatgaccttctccgatggccttaccttgaacaggattcagatg
cacaatgcgggttttggccctctcactgacctcgtctttacctttgccaaccaactcctg
ccacttgaaatggatgacaccgagactggccttcttagtgccatctgtctgatctgtggg
gaccgccaagatctggaagatgcagaaaaggtggacaaattgcaggaaccacttttggaa
gctttaaagatttatatacggaaaagaagacccaataaaccccatatgttcccaaagata
ttaatgaaaatcacagatttgcgcagcatcagtgcaaaaggtgcagagcgtgtcatcaca
cttaagttggagattcctggatcaatgccaccccttattcaagaaatgctggaaaactca
gaagggcatgatccccttgcaccctcagcaaacacaagcacagggagtactgggagcagc
agtcaagcactagaagcaacttccagccccagtctgtctcccagttctgcagccaatgga
ccaaacagccaggtaccaaacacacagtaa
DBGET
integrated database retrieval system
