Scyliorhinus canicula (smaller spotted catshark): 119966138
Help
Entry
119966138 CDS
T11175
Symbol
igf2bp3
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119966138 (igf2bp3)
03041 Spliceosome [BR:
scau03041
]
119966138 (igf2bp3)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119966138 (igf2bp3)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119966138 (igf2bp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
RRM_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_NusA_1st
KH_NusA_2nd
MOEP19
KH_Vigilin
KH_DEAH11
RBD_DEAH11
DHH
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
119966138
NCBI-ProteinID:
XP_038653333
LinkDB
All DBs
Position
5:94808643..95008570
Genome browser
AA seq
599 aa
AA seq
DB search
MNKLYIGNLTENVTTVDLESLFKEWKIPFTGQFLVKTGYAFVDCPDDSSAMKAIDTLSGK
VELHGKSIEVEHSVPKRQRSRKLQIRNIPPHLQWEVLDSLLAQYGSVENCEQVNTETETA
VVNVTYSTKEHARQAIEKLNGYMLENFSLKVTYIPDEMAAQQSLQQIPSQARRGFGQRGP
PRQGSPNGTVRPKQQQSDVPLRIMVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKDNA
GAAEKPISIHSTPEGCSAACKMIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGR
NLKKIEQDTDTKITISPLQDLTLCNPERTITIKGSIEACSKAEEEIMKKIRESYDNDMAA
MNLQAHLIPGLNLKALGLFPQSSPVLPPPSVPPAYTPFGSYPNFCDVYALSSIASGGQQL
AQQSESETVHVFIPALAVGAIIGKKGQHIKQLSRYASASIKIAPAEGPDAKQRMVIISGQ
PEAQFKAQGRIYNKLKEENFFGPKEEVKLETHIKVPSHAAGRVIGKGGKTVNELQNLTSA
EVVVPRDQTPDENDQVIVKITGHFFASQLAQRKIQDILIQVKRQQQKTVQSGQPQPRRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctctatattgggaatctcaccgaaaacgtaaccactgtggacttggagagt
ctgttcaaggaatggaagattcccttcactgggcagtttttggtgaagaccggttatgct
tttgtcgattgcccagatgatagcagtgctatgaaagctatagacacactgtcaggtaaa
gtggaactgcacgggaaatctatcgaagtagaacattccgttcccaaacgacaaaggagt
cggaaacttcagatcaggaacataccccctcacttgcagtgggaggtcctggatagtttg
ttagctcaatatggttcagtggagaactgcgagcaagtaaatacagaaacggagactgca
gtagtgaatgttacatattctaccaaggaacatgcaagacaggcaattgaaaaacttaat
ggctatatgttggagaatttttcactaaaagtaacctatatccccgatgagatggccgct
caacagagtttgcaacagataccttcacaagcccgacgtggatttgggcaacgaggtcca
cctcggcaagggtctccgaacggaacagttagaccgaaacagcagcagtctgatgttcct
ttgcgaatcatggttccaactcagtttgtgggtgccatcattgggaaggaaggagccaca
atccggaatatcacaaaacaaacacagtcaaagattgacattcatcgtaaagataacgca
ggtgctgctgagaaaccaataagtattcactcaacaccagaggggtgttcagctgcttgc
aagatgataatggaaatcatgcagaaggaagctcaggatacaaaattcacagaagaaata
cctttaaagattttggcacacaacaattttgttgggcgtctcattgggaaagaaggaaga
aatctgaaaaaaatcgagcaagatacagacactaaaatcacaatttccccgttgcaagac
ttgacgctttgcaatccagaaaggacaattacaataaaaggcagtattgaagcatgttcc
aaagctgaggaagaaattatgaagaaaattagagaatcttacgataatgatatggctgct
atgaatcttcaagcacatttaatccccggcctaaatctgaaagctctaggcttatttcct
caatcgtcacctgtactgccaccgccttctgtacctcctgcttatactccatttgggagc
tatccaaatttctgtgatgtgtatgcgttatcgagcattgcttcagggggccagcaacta
gctcagcagtccgaatctgaaacggttcacgttttcatccctgccctggctgtaggtgca
attattggcaagaaggggcaacacatcaaacaactctctcgctatgcatcagcttccatt
aagattgctcctgcagaaggcccagatgctaaacagcgaatggtgatcatctctgggcag
cctgaagctcagtttaaggctcaaggcagaatctataataaactgaaagaagagaacttc
tttggacccaaagaagaagtgaaattagagacccatatcaaagtgccaagccatgctgct
ggtagagttattgggaaaggaggcaaaacggtaaatgaactacagaacttgaccagtgca
gaagtagtagttcctcgtgatcaaacaccagatgaaaatgatcaggttattgtgaaaatc
actggtcacttctttgcaagtcagcttgctcagcgaaaaattcaagacattttgatccaa
gtaaaaagacaacaacagaaaacagtgcagagtggacagccacaaccacgaagaaagtaa
DBGET
integrated database retrieval system
