Scyliorhinus canicula (smaller spotted catshark): 119966155
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Entry
119966155 CDS
T11175
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119966155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119966155
04147 Exosome [BR:
scau04147
]
119966155
04090 CD molecules [BR:
scau04090
]
119966155
Enzymes [BR:
scau01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
119966155
Transporters [BR:
scau02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
119966155
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119966155
CD molecules [BR:
scau04090
]
Proteins
119966155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_16
Rad17
DUF815
Zeta_toxin
AAA_15
MeaB
AAA_29
AAA_24
AAA_7
SLM4
Motif
Other DBs
NCBI-GeneID:
119966155
NCBI-ProteinID:
XP_038653368
LinkDB
All DBs
Position
5:complement(98534436..98700588)
Genome browser
AA seq
1280 aa
AA seq
DB search
MQQVTMEADGANLSNGDFSKAKYKKEPLEDAKEKNRHEKHKDEKKVEKVQSVSALQMFRF
ADSLDVLLMVVGVIAAMAHGMCLPLLSIVFGDMTNGFICQANSGNESLNMTDCDDTPFEE
QMAMFSYYYVAIGGGALLCAYIQVSFWVMTSARQTRRLRKIFFHTLLRKEIGWFDVNPVG
QLNTRLTADINKINEGIGDKIGLLFQYISTFVGGIIIGFARGWKLTLVILAASPLLALSA
VLWSKLTVSFTNLEMTAYAKAGAVAEEVLGAVRTVVAFGGQRKEIERYQKNLGEAKKIGI
KKAITANLSVGFAYFIIFGSYAIGFWYGTTLVLENTGYTIGTVLTIFFCVTFGTFSIGQT
APYIEAFSNARGAAFEIYKILNEKSAIDGFSEEGYKPDQIKGIVEFKNVHFNYPSRADVQ
VLKGLNLKIDSGQTVALVGSSGCGKSTTIQLLQRFYDLQEGMITVDGHDIRSLNIRHFRK
LIGVVSQEPVLFATTIAENIRFGRVDVTDSEIETATKEANAYDFIIKLPDKFNTLVGERG
TQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKASTGRTTILIAHR
LSTIRTADMIASFQNGVLVEQGTHAELMQKNGVYHSLVLAQAFKSTEEEKGIENGTEQDE
SSHVVYKRTLSNKSSTRSTTQIETEVEENKAEVEKLKSVSFLKLFKLNKSEWPYIFLGVI
GAIVNGATHPAFCIIFAKIISIFTETDTAVIRQQANLYSILFCVIGIVSFVTYFLQGFMF
GKAGETLTQKLRYMAFKAMLRQEIAWFDDKNNSTGALTTRLATEASQVQTTVGSRLGLIA
QNVASFGAAVIISFIFGWQMSLLVLAIVPILAVAGVVEMKSLTGYTSRDKKELEAAGKIA
TEAVENIRTVVSLTIEPTFEKMYDENLELPYRNAKKKSQVYGGAFALSQAIQYFSYAASF
RFGAYLISINAMDVESVFLVFNAIVYGAVAIGQSSSFAPDYAKAKVAAMNLFALFERVPM
IDSYRTDGLTLEEFNGNLKFSNVHFRYQSRPDITVLEKLSIKVGKAQTLALVGSSGCGKS
TSVQLIERFYDPLKGEVLLDGIDVKKINIQWLRSQIGIVSQEPVLFNCSIAENIAYGDNS
RTVSQEDIEKAAKAANAHSFIEQLPDKYNTRVGEKGAQLSGGQKQRVAIARALIREPKIL
LLDEATSALDTESEKIVQEALDKAREGRTCVVIAHRLTTVQNADVIAVIDNGKVIERGTH
EQLLAKHGAYYNLVNAQVIL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggtaaccatggaagcagacggtgcaaatttgagcaatggtgactttagcaaa
gcaaaatataagaaagagcccctggaagatgccaaggagaagaatagacatgagaaacat
aaagatgaaaagaaagttgaaaaagtacaatcagttagtgctcttcagatgtttcgtttt
gcagatagtctggacgttttactgatggtagttggagttatagctgcaatggctcatgga
atgtgccttccgctattgtcaattgtttttggtgatatgacaaatggctttatatgccag
gcaaactctggcaatgaatcacttaatatgacggattgtgacgacacaccctttgaagaa
caaatggctatgttctcctattactatgttgcaattggaggaggggcactattatgtgct
tacatccaagtttccttttgggttatgacttcagcaagacagacgagaaggctccgaaag
atattttttcacactttactgagaaaagagattggctggtttgatgttaacccggttggg
caactcaacacacgactaacagctgacatcaacaaaatcaatgagggcattggtgataag
attggacttttgttccagtacatctcaacttttgtaggaggcataataattggttttgca
agaggatggaaactgacactggtcattctggctgccagtcccctccttgcattgtcagct
gtgctgtggtctaagctcacagtctcattcactaatctggagatgacagcttatgcaaaa
gctggagccgttgcagaagaagtgttgggggcagtccgaacagtggtggcctttggaggg
caaaggaaagaaattgaaaggtaccagaagaatctaggagaagcaaagaagattggtata
aagaaagctattactgccaatctgtctgttgggtttgcctactttataatatttggatcc
tatgcaataggattttggtatggaactactttggttcttgagaacacaggatacaccatt
ggaacagtccttactatttttttctgtgtcacatttggaacattttctattggccaaaca
gcaccttacattgaagcattttctaatgccagaggagctgcatttgaaatctataaaata
ttaaatgagaaatccgccatagatggtttctcggaagaaggatataaaccagatcaaatt
aaaggaatagtggaatttaagaatgtgcattttaactacccatcacgagcagatgtacag
gttttgaaaggtctgaatttgaagattgacagtggacagacagtggctctggtcggaagc
agtggctgtggaaaaagcaccaccattcagttactacagagattttatgatctccaggaa
ggaatgattacagttgatggccatgatatacggtcactaaatatcaggcattttcgaaag
ttgattggtgtggtcagccaagagcctgtactttttgctacaacaattgctgaaaacata
cgatttggacgtgtcgatgttacggattcagaaattgagacggctacaaaagaagcaaac
gcctatgattttatcataaaacttcctgataaattcaatacccttgttggggagagaggt
acacaactgagtgggggacagaagcagagaattgcaatcgcccgggctctggtgcgtaac
ccgaagattctcttgttggatgaagccacttctgcccttgacacggagagtgaagctgtt
gttcaagcagcattggataaggcaagtacagggcgtactacgatcttgattgctcatcgt
ctatcaacaatcaggactgcagacatgatagccagctttcaaaatggagttttagtggaa
caagggacacatgcagaactgatgcaaaaaaatggagtttatcactcacttgtattggca
caggcatttaaaagtacagaggaagaaaaaggaatagaaaatggaacagagcaagatgaa
tctagccatgttgtttacaagcgcacattatccaacaaatcaagtactagaagcacaact
cagattgaaaccgaagtggaagaaaataaggcagaggtagaaaaactgaaaagcgtttca
tttctaaaactttttaagctgaataaatcggagtggccatacatatttttgggagtcata
ggtgcgattgtcaatggagcaactcaccctgcattttgcattatatttgcaaagattatc
agtatcttcactgaaactgatacagcagtgatcaggcaacaagcaaatctttactctatt
ttattctgtgttattggtatagtttcctttgttacatatttcttgcaaggatttatgttt
ggaaaagctggagaaaccctaactcagaaactgagatatatggccttcaaggcgatgcta
cgtcaggagattgcttggtttgatgataaaaataacagcactggagccctgactacaaga
ctggctacagaggcatcacaagtccaaacaactgtaggctcaagactcggactaatagca
caaaatgttgcaagctttggagctgcagtcattatttcattcatatttggatggcaaatg
agcctgttggtcctagcaatagtgcccattcttgctgtggccggggtggttgaaatgaaa
tctctgacaggatacacaagtcgtgataaaaaggaacttgaagcagctggcaagatagca
acggaagctgtggaaaatatccggactgttgtttctctaactatagaaccgacatttgaa
aaaatgtacgatgaaaatctagagctgccatatagaaatgctaaaaagaaatcccaggtc
tatggtggtgcttttgcattgagccaggctatccaatacttcagctatgcagctagtttt
cgatttggtgcatacctgatatcaataaatgcaatggatgtggaaagtgttttcctcgtt
tttaatgctattgtgtatggtgctgtggcaattggacaaagcagttcttttgctcctgat
tatgccaaggccaaagttgctgctatgaacctgtttgctctcttcgagcgtgtgccaatg
atagacagctacagaactgatgggctgacactggaggaatttaatggtaacttaaagttc
tccaacgttcacttcagatatcagagtcgtccagatataacagtgctcgagaaactatca
atcaaggttggaaaagctcagactttagcactggttggcagcagcggatgtggtaaaagc
acctctgtgcagctcatagaaagattctatgatccactgaaaggagaagtgcttctagat
ggaattgatgtcaaaaaaattaacatccaatggcttcggtctcaaattggaattgtatcc
caggaacctgtgctcttcaactgtagtattgctgagaatatcgcctatggtgacaacagt
aggactgtatcacaggaggacattgagaaggcagcaaaggcagcaaatgctcactcattt
attgaacaactccctgataaatacaacactcgagttggggaaaaaggggctcagctttct
ggtggacagaagcaacgagtggctattgcacgggccctcatacgggagccaaagattctg
ctgttagatgaggcaacatctgcacttgatacagaaagtgaaaagattgtccaggaggct
cttgacaaagcaagggaaggaaggacctgtgtggtaatcgctcaccgtctgacgacagtg
cagaatgcagatgtgatagctgttattgacaatggaaaagtaatagagcggggtacacat
gagcagctgctggcgaaacatggggcttactataatctagtaaatgcccaggtcattcta
taa
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