Scyliorhinus canicula (smaller spotted catshark): 119966239
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Entry
119966239 CDS
T11175
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
scau
Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119966239 (wdtc1)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119966239 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
TPR_19
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
TPR_2
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_11
DSE1_N
TPR_1
Beta-prop_HPS5
TPR_16
TPR_17
PAC11
ANAPC3
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_SPT8
TPR_6
TPR_14
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_WDR41
TPR_BSK1_C
Beta-prop_WDR35_TULP_N
NBCH_WD40
CFAP70_TPR_C
RMD1-3
TPR_9
Barstar
Motif
Other DBs
NCBI-GeneID:
119966239
NCBI-ProteinID:
XP_038653521
LinkDB
All DBs
Position
1:111116018..111242370
Genome browser
AA seq
672 aa
AA seq
DB search
MEPLNITRDIIQRQIKEKNTLQFERRYHVIDPFIKRLGLECELEGHSGCVNCLEWNEKGD
LLASGSDDQHAILWDPFSCKKLLTMHTGHTANIFTVKFLPHSNDRTLITGAADSKVHVHD
LTVKETVHMFGEHTNRVKRIAAAPMWPNTFWSAAEDGTVRQYDLRESSKRSQVLVDLTEY
CGQHVEAKCLAINPQNNNYLAVGASGPFVRVYDVRMIHNHRKTVKQSLTPGLHTFCDRYK
SVPDGAVQYYVAGHLPVKQPDYNNRLRVLVATYVAFNPDGTELLVNMGGEQVYLFDLTNK
QKPYTFLLPKKCHSSTDLQNAKSTTNGVTNGIHLHSNGFRLSNAWAQSSVPNELPLHLER
LKQQANDAFSRQQWTQAIQLYSKAIQQAPGNPMLYGNRAAAFMKRKWDGDHYDALRDCLK
AISLNPSHLKAHFRLARCLFELKYVAEALECLDDFKGRFPDQAHSSACDALDRDIKAVLF
AKTDSSEEKKAGTTTPIRIRSSGRKDSISDDEVILRERGYDYKSRYCGHCNTTTDIKEAN
FFGSNGQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPKHCFLATSGIDPVV
RLWSPRPETEDQNERVIEDMEGASQANQRRMNADPLEVMLLNMGYRITGLTNSGMASDDE
ENSEGQVQCRPS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagccgctgaacataaccagggacatcatccagcggcagataaaggagaagaacaca
ctacagtttgagcgtcgatatcacgtcattgatccattcataaagcggctgggcctggaa
tgtgagctggagggtcactctgggtgtgtgaactgtctggaatggaatgagaagggcgat
ttgctggcctcaggatcagatgatcagcatgccattctctgggatccctttagctgcaag
aaactgctgactatgcacactggacacacggccaacatattcacagtgaagttccttccg
cactcaaatgaccgcacgctgattactggagctgccgattccaaggtgcatgtccatgac
ttgactgtgaaggaaaccgttcatatgtttggcgagcacactaatcgtgtgaagcgaata
gcagctgctcccatgtggccaaacacattctggagtgcggcagaggatgggacagtccgg
cagtatgacctgagagagagcagcaagcgctcgcaggtactggtggatcttacggaatac
tgcgggcagcatgtggaagctaaatgcctggccattaatcctcagaacaataactacctt
gctgttggagcgagtggtccctttgtgcgagtttatgatgttcgcatgattcacaatcac
agaaaaacagtaaagcagagcttgacccctgggttgcacacattctgtgataggtacaag
tcagtgccagatggagctgttcagtattatgtggcaggtcatctcccagtgaagcagcct
gattataacaatcgcctccgtgtgctcgtagccacatatgtggcattcaaccctgatgga
actgaactcttagtcaacatgggaggggagcaggtctatttgtttgatctgacgaataaa
cagaagccctacacatttctactacccaagaagtgccactcctctactgatttacagaat
gcaaaatcaacaacaaatggagttacaaatggaatccatctccacagtaatggcttcagg
ctgtcgaacgcctgggcacaaagcagtgttcccaatgagctgccacttcatctagagaga
ctcaaacaacaagcaaatgatgccttctcccggcaacaatggacacaggctatccaactt
tacagcaaggccattcagcaagctcctgggaatcccatgctttatggcaacagagcagca
gccttcatgaagcgcaagtgggatggagaccattatgatgccctcagagattgtttgaaa
gcaatttctttgaatccctcccacctgaaggcccatttccgcctggcacgttgtttattt
gagttgaagtacgtcgctgaggctctggagtgcctcgatgactttaagggccgttttcct
gatcaagcccacagcagtgcctgcgatgcactggatcgagatatcaaggccgtgctcttc
gcaaagactgacagctctgaagagaagaaggcaggaactaccaccccaatccgcatccga
tcaagcggcaggaaggattccatctccgatgatgaagtgattctgagggaacgaggttat
gattacaagtcacgatattgcggtcattgtaatactaccacagacatcaaagaagccaac
ttttttggaagtaatggccaatacattgtcagtggttcagatgatggatccttcttcatc
tgggagaaagaaacgacaaaccttgttcgtgttctacagggtgacgagtcgattgtgaac
tgtctgcaacctcacccgaagcactgcttcctcgcaacaagtggcattgatcctgtggtt
cggctctggagcccaagaccagaaactgaagatcaaaatgagcgagttattgaagacatg
gagggtgcttcacaagcaaaccagcggcgaatgaatgcagacccacttgaggtcatgctc
ctgaatatgggatacaggatcactggactgaccaacagtgggatggcctcagatgatgag
gaaaactctgaaggccaggtgcagtgccggccgagctaa
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