Scyliorhinus canicula (smaller spotted catshark): 119966255
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Entry
119966255 CDS
T11175
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X2
KO
K14827
pre-rRNA-processing protein IPI1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119966255 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119966255 (tex10)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
119966255 (tex10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
HEAT_GCN1
MMS19_C
DOP1_C
TOR1L1_N
Cnd1
MMS19_N
HEAT_GCN1_C
TPR_IPO5
TPR_DNAAF5
HEAT_GCN1_2
HEAT_EF3_N
Nuc_sug_transp
Motif
Other DBs
NCBI-GeneID:
119966255
NCBI-ProteinID:
XP_038653572
LinkDB
All DBs
Position
5:128293709..128446035
Genome browser
AA seq
928 aa
AA seq
DB search
MTKKRKRQDDFQKVKLKVGKRKPKADNATDTSFKTHAIHVPEQLKSDASLPTNHRKLNIK
DLLTQLHHYSSGVKQSALIGLKDLVSQHPSVIASHLSSILNDVAAVFTDKDPTVRSATVQ
LLNFLAPRISGDQMAPFYPLVCAHLSSAMTHIVEGIQEDALKILDILLEHYPELLTEHSS
VLLKNFLELISHQRLSKELKAGGKMSSWMLSVNPNRRITSQQWRLNVLSRLRKFLQAIVE
GSCQSVENEAIFESDDRIGPEHVTTLQVKWENYVTGQQQIQLFEHSGSQPSTVIPFKLRP
LLDAEESLSSVENLKGFIQILVPLLLECWVEASPAQLAAPTPSNLLETEAMMLRLQVLSI
IQLLWKLMQHQDETLKLESWLRNHYLCDFKDHFLKHFPYSVLETARHKKKEGAKKDKRAA
AFMSSGDHPLALNLALCQVMVSLTNALTVHLDTDWLEQIRKFVTESLSDGRKLTSQQLNG
MLMLVWRLVLVQCNRGSTEELLRAVYAQYQQQGLSLSVRTMLLNFFSGLYLREKTSSNLQ
ISRSKVLSRWLAGLPLQLAQLGSRNPLLSAQLIDVIHVAAARSNKELLQSLQSNVYRLYD
PQDGTMVLLPTGTQHSLVQLVYFLPLISSELLSCLSRCCTMGRLSSKLAISLIRILHTRS
SFGGWTTSLPESIVNDVDYFSFLFSTLTGFSGEELTWLQSSSSNPHISQSQFSSVRLYVT
DLDQFVHHWALTEAVCQCLSTIPSRIQCCDILQNAICKHLVSVHLLPDSTAGSILKAVGQ
LIDPAFIPNECLLNFLAGCCYSLLHFILTLERNSRGNAQKRELLWGSCLAALVRIPRLLR
LMLQSLQVNGTCQEELPVIAQILRLLLQQAQLRQHMVANAALVQQVIQDITNFKTEDSQE
QWLIDLHYCFRIYLATQHRNSTNFPVAY
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaagagaaagcgtcaagatgacttccaaaaggtgaagctaaaagttggtaaa
aggaaaccaaaagcagacaatgcaaccgacaccagcttcaaaacacacgccatccatgtt
ccagagcaactgaagagtgatgcatcattgccaacaaatcaccgcaaacttaacataaag
gatctactgacacagttgcaccattatagttcaggtgtcaaacagagtgctctaattggt
cttaaagatcttgtatctcagcatccatcagtaatcgcatctcatctttccagtattcta
aatgacgtagcagctgtgttcacagacaaagaccccacagtcagatcagcaacagtacaa
cttttaaactttcttgctccaagaatttctggtgatcaaatggctcctttttatccattg
gtttgcgcacacctttccagtgcaatgactcacatagtggaagggatacaagaagatgcc
ttgaagatcttggatattttgttggaacattatcctgaacttctaacagaacatagcagc
gtcttactgaaaaattttctcgagctcatttcacatcagagattgtcaaaggaattgaaa
gctggagggaaaatgtcgtcctggatgctatctgtcaacccaaaccgccgcattacctct
cagcaatggcggcttaatgtactgagtaggttgagaaaattcctacaggcaattgttgag
ggttcatgtcagtctgtggagaatgaagctatttttgagagtgacgacaggattgggcct
gaacatgtgaccacgttgcaggtcaagtgggagaattatgtaactggacagcagcaaata
cagttgtttgagcactctggatcccaacccagtactgtgattccattcaaactaaggcct
ttacttgatgctgaagaaagtttgtcctcagtggagaatctgaaaggattcattcagata
ctcgtgcccctccttttagaatgttgggtggaagcctctcctgctcagcttgctgctccg
acaccaagtaatctacttgaaacagaagccatgatgcttcggttgcaggttctcagcatc
atccaactgttgtggaaactaatgcagcaccaggatgagactttgaaactagaatcctgg
ctaaggaatcactacctctgtgattttaaagatcacttcttaaagcattttccttattct
gtgttagagacagccagacataaaaagaaagaaggggctaaaaaggacaaacgagcagca
gcattcatgagcagtggagatcatcctcttgcattgaaccttgctttgtgtcaggttatg
gtgtcactcaccaatgctttaactgtccatctggatactgactggttagagcaaatacga
aaatttgtgacagaaagcttatcggatggcaggaaattgacatctcagcagctgaatggg
atgctgatgttggtgtggagacttgtacttgtacagtgcaacagaggttccacagaggaa
ttgctgagggcagtttatgcacaataccagcagcagggtctttctctttcagttcgcacc
atgttgcttaatttctttagtggtctttatctgagagagaaaacatcatccaatcttcaa
atttctagaagcaaagtgctgtctcgttggctagctgggctgccattacagctggctcaa
cttggttcaaggaatccacttctctcagcacaacttattgatgtgatacatgtggccgct
gcccgttcaaacaaagagctgcttcagagccttcagagtaatgtctacaggttgtatgat
ccacaagatggcactatggtccttcttccgactggaacacagcattctttagtgcagctg
gtctatttcttaccacttatttcatcagagttgttgtcttgcctaagtcgttgctgtact
atgggaagattgtcctccaaactagccatcagtcttatccgaatactacatacaagatca
tcttttggtggatggactacttcacttccagaaagcatagtcaatgacgtggattacttc
agttttctgttttctacactgacaggattctcaggagaagaattgacttggcttcagagc
agcagcagtaatcctcatataagccagtcccagttttcatctgtgcgcctttatgtaact
gatcttgaccagtttgtacatcactgggccttgactgaggcggtatgccaatgtttatcg
actataccttccagaatccagtgctgtgacatcttacaaaacgccatctgtaaacatcta
gtgagtgtccatctcttgccggacagcactgcaggatcaatcttaaaagctgttggccag
ctgatagatccagcctttattcccaatgagtgcttgttgaatttccttgccgggtgttgc
tacagcctccttcacttcatattaactttggaaagaaacagcagaggaaatgcacaaaag
agagaattgctgtggggatcatgccttgccgcattggtccgcatcccccgtttgctgcga
ctgatgctgcagagtctgcaagtaaatggcacctgccaagaggaacttcctgttattgca
cagatccttcgcctcctgcttcagcaagcacagcttaggcagcacatggtagcaaatgca
gcactcgtgcaacaggtcatacaggatatcacgaacttcaagactgaagattcccaagag
caatggttaatcgaccttcattactgcttcagaatctaccttgcaacacagcaccgaaat
tcaacaaattttccagtggcctactaa
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