Scyliorhinus canicula (smaller spotted catshark): 119966279
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Entry
119966279 CDS
T11175
Symbol
zgc:110045
Name
(RefSeq) poly(rC)-binding protein 3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119966279 (zgc:110045)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119966279 (zgc:110045)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
KH_5
MOEP19
RemA-like
Motif
Other DBs
NCBI-GeneID:
119966279
NCBI-ProteinID:
XP_038653618
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Position
5:132635493..132962097
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AA seq
510 aa
AA seq
DB search
MVKHFYTEQETRQDTTTEVQLLVPVFLGENRVPPNFRMNKSDSKVTEGGLNVTLTIRLLM
HGKEKISFTKPFAQMVWVLTSCCSVMEEVGSIIGKKGETVKKMREESSARINISEGSCPE
RIVTITGPTDAIFNAFSMIAHKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKG
GSKIKEIRETTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATI
PYRPKPASAPVIFAGGQVRADTILASAGNHSVLAHHQPAPAYTVQGQYAFPHPDLTKLHQ
LAMQHTPFTPLGQTTPGFPAGLDATGQTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGA
QIKIANATEGSTERQVIITGSPANISLAQYLINASLEMAKVSTQTASVMNPVDLNVNLSQ
SAIPTSTPTSVAVLTAAAAASMVNVNPPSPLPTPHYAVPVSSLLGMKTVPLLALNAAAAT
GAPGSLSTYTPKIPSTSGVKKSDRQKFAPY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacatttctacacagagcaagagacacgacaagatacaacgactgaagtgcag
ctattggttccagtatttttgggtgaaaacagagtgcctccaaacttcagaatgaataaa
tcagattccaaagtgactgaagggggactgaacgtcactcttacaattcgcctacttatg
catggaaaggagaagatctcctttacaaagcccttcgcacagatggtctgggtcttaact
tcatgctgctctgtgatggaggaagttggaagcattattggaaagaaaggagagacggta
aaaaagatgagggaggagagtagtgcaagaatcaacatttcagaagggtcctgtccagag
cgtattgtaacaataacaggcccaacagatgccattttcaacgccttttcaatgatagca
cacaaatttgaagaggatataaatgcttcaatgacaaatagtacagtgacaagtaaacca
cctgtgacattacgtctagtagttccagcaagccaatgtggttctctcatcgggaaagga
ggttcaaagatcaaggaaatccgtgagaccacaggggcccaggtgcaggtagcaggtgat
atgcttccaaactccactgaacgcgcagtaactatttctggcacaccagatgccatcatt
caatgtgtaaaacaaatctgtgtggtgatgctggagtccccacccaaaggcgctaccatt
ccctatcgcccaaagcctgcctctgcacccgtcatttttgcaggtggccaggtaagagca
gacaccattttggcttccgcaggaaaccacagcgtcttggcccaccatcagccagcacct
gcatacacagttcagggacaatatgcctttcctcatcctgacttgaccaagcttcatcag
ttggctatgcagcataccccttttactccccttgggcagaccacccctggtttccctgca
ggactggatgctactggtcaaaccagttcccatgagctcactattccaaatgatttaata
gggtgtattattggcagacaaggaagcaaaataaatgaaattaggcagatgtcaggagca
cagatcaagattgctaatgcaacagaaggttccacagagcgacaggttatcatcacagga
tcacctgccaatattagcttggcacagtacctcataaatgcaagcttagagatggctaaa
gtcagcacccagactgcttccgtcatgaaccctgttgacctgaacgtgaacctctctcag
tctgccatccctacctcaacccccacctctgtggctgttttgacggcagcagcagctgcc
tccatggttaatgtgaatcccccttcccctttaccaacgccccactatgccgttcctgtc
tccagtctgcttggcatgaaaactgtcccgcttctggcacttaatgccgcggctgctaca
ggggccccagggagtttatctacttatactcccaaaattccttcgacgagtggggttaag
aaatctgaccggcagaagtttgctccgtattga
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