KEGG   Scyliorhinus canicula (smaller spotted catshark): 119966342
Entry
119966342         CDS       T11175                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04137  Mitophagy - animal
scau04144  Endocytosis
scau04145  Phagosome
scau04148  Efferocytosis
scau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:scau00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119966342
   04145 Phagosome
    119966342
   04137 Mitophagy - animal
    119966342
   04148 Efferocytosis
    119966342
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119966342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scau04131]
    119966342
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scau04147]
    119966342
   04031 GTP-binding proteins [BR:scau04031]
    119966342
Membrane trafficking [BR:scau04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    119966342
 Endosome - Lysosome transport
    119966342
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   119966342
  Exosomal proteins of other body fluids (saliva and urine)
   119966342
  Exosomal proteins of colorectal cancer cells
   119966342
  Exosomal proteins of bladder cancer cells
   119966342
GTP-binding proteins [BR:scau04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    119966342
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 119966342
NCBI-ProteinID: XP_038653774
LinkDB
Position
5:154867861..154915073
AA seq 216 aa
MANRGGAARPNGPAAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNDDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVEFQEAQSYADDNSLLFMETSAKTSINVNEIFLAIAK
KLPKNEPQNTGPNSGRSRGVDLHEPTQQTKSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaaatcggggaggcgcagcgagaccgaatggaccagctgctgctaacaaaatctgc
cagttcaagcttgttctacttggagagtctgctgttggcaagtctagtttagtgctacgt
tttgtgaagggacagttccatgaatatcaagaaagtactattggtgctgctttcctaact
caaactgtctgcctggatgacacaactgtgaaatttgaaatatgggacacagcaggacaa
gaaagatatcacagcttggccccaatgtactatcgaggagcacaagctgctatcgtggtt
tacgacattacaaatgatgatacttttgtacgggccaagaattgggttaaggagcttcag
aggcaagcaagtcctaacattgtaatagctttagcagggaacaaggctgatcttgctaac
aagagagcagtagagttccaggaagcacagtcctatgcagatgacaacagcttattattc
atggagacatctgcaaagacttcaattaatgtgaatgaaatatttttggcaatagcaaag
aaattgcctaagaatgagcctcagaatacaggaccaaacagtggaagaagcagaggagta
gatcttcatgaacccacccaacagacgaagagccagtgctgtagtaactag

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