KEGG   Scyliorhinus canicula (smaller spotted catshark): 119966386
Entry
119966386         CDS       T11175                                 
Symbol
itga8
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04510  Focal adhesion
scau04512  ECM-receptor interaction
scau04514  Cell adhesion molecules
scau04810  Regulation of actin cytoskeleton
scau04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:scau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119966386 (itga8)
   04514 Cell adhesion molecules
    119966386 (itga8)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119966386 (itga8)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119966386 (itga8)
   04810 Regulation of actin cytoskeleton
    119966386 (itga8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:scau04515]
    119966386 (itga8)
Cell adhesion molecules [BR:scau04515]
 Integrins
  Integrin alpha subunits
   119966386 (itga8)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Integrin_alpha
Other DBs
NCBI-GeneID: 119966386
NCBI-ProteinID: XP_038653879
LinkDB
Position
5:164318463..164572442
AA seq 1051 aa
MPVRRCRHALSSRAASCHSLLLLLLPGCVAFNLDVSQPAVYSGPQGSHFGYSVDFYSPDQ
NTVNILVGAPKANTSQPRIVEGGAVYFCSWAAGGAPCSQIPFDKSSNRTIRVNGTKEPVE
FKSNQWFGATVKSHKGKVVACAPLYHWRTFKLTQEKDPVGTCYVAVHNFSDYAEYSPCRS
GPEDPEGQGYCQAGFSLDFTEDGNLVLGGPGSFYWQGQVITAGIFDILNGYDFRNLKRRV
NGERQTGVAPADYDDNYLGYSVAVGEFTGDSQQELVAGIPRGAQAFGYVAIINATDMTFI
LNFTGEQMASYFGYTVAVSDINNDGLDDVLVGAPLFMDRESDGKLKEVGLVYLYLQEEEF
LFKDAQRLLGTEVFGRFGSAVAPLADLNQDGYNDIAIGVPFGGEDRRGKVLIYNGHSTGL
ISKPSQVLDGLWPSDSMPPGFGFTLQGGSDIDKNEYPDLIIGAFGASKVAVYRARAVVTV
DAQLQLNPSIINPENKSCQLLGSETLVSCFTVRVSANVSGHGIPGTVVLNASLQLDRLKQ
KGGIERTLFLNYHRPQHTFQLVIGKLERSKYQEFIVYLTDEKEFRDKLTPISVSLNYSLD
DSYSSGDLKPIINYYSETFLQKQAHILLDCGKDNVCIPALKLSVTPDRQQLIFGDENPLT
LIVNGRNEGEGAYEAELSVIIPPEADYIGVVRNNEALSTLSCAYKVDNSTQMVVCDLGNP
MTAGTNLSVGLRFSVQRLGAAQASISFDLQIKSSNKDNSSSNLVQLQVKISAVARVGVRG
VSRPEQIFLPITDWKIKERLQNEEHIGPVVQHVYELHNSGPSAISAAVMEVHWPSNYRDE
YLLYILQLKTNGPLHCHTNATINPLQLETVDPSATGEHISLREPPTTTHHITRREVRLPQ
PLKYEQSKVLDCNNINCTKIVCHVDQLGRGQSAVLKVRARLWVQTFLKRRNNHYSLQSLV
SFAVKEMAYKIQPEELPSSSTVIRTSVIWATPDASLAIPLWVIILAVLVGLLVLAILILV
MWKFGFFDRARPPQDDMRDREQLHPKKDTDA
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgcctgtccgccgctgccggcacgcgctcagctcccgggccgcttcctgccactcgctg
ctgctgctgctgctcccgggatgtgtcgccttcaacctggatgtgtcgcagccggcggtg
tacagcggaccccagggcagtcacttcggatactcggtggatttctactcgcctgatcag
aacacagtcaatatccttgttggagctccgaaagccaacaccagccaaccgcggatagtg
gaaggaggagcggtgtacttctgcagctgggcagcaggaggtgccccttgcagccagatc
cccttcgacaaatccagcaacagaaccatcagagttaatggtacaaaggaacctgtcgaa
tttaaatccaatcaatggtttggggctacagtcaaatcacataaaggaaaggttgtggct
tgtgcccctctgtatcattggcgaacctttaaattgactcaagaaaaagacccagttggc
acctgttacgtggcggttcataatttcagtgactatgcagaatattctccatgtcgttct
ggtccggaagatcctgaaggtcaaggttattgccaagcaggatttagccttgattttacc
gaggatgggaatctggtgcttggaggacccggcagcttttactggcaagggcaggtgatt
actgcaggaatatttgacattttaaatggatatgacttcagaaatttgaaacgtagagtg
aatggagaacgacagactggagtggctcctgctgattatgatgacaactacctaggatat
tcagttgccgtgggggaattcacaggagactcccaacaagaacttgttgctggaattcca
aggggcgctcaggcttttggatatgttgccatcataaatgcaacagatatgactttcatc
ttgaattttactggtgaacagatggcttcctacttcggatataccgtggctgtctctgat
ataaacaatgatggattggatgatgtgctcgtcggcgctccacttttcatggaccgggag
tctgacggaaagttgaaggaagttgggctggtttatctgtacctgcaggaggaagagttc
cttttcaaggatgcccagagactactcggaactgaagtatttggaagatttggcagtgca
gtagcacctttggcagatttaaatcaagatggatataatgatattgcaattggtgtacct
tttgggggtgaagacaggagaggcaaggtgctgatttacaatggtcacagcactgggtta
atttccaagccatcacaggtcctggatggcttgtggccctctgattccatgcctcctgga
tttggctttaccttacaaggaggctcagacatagacaagaatgagtacccagacctgata
atcggtgcctttggagctagtaaagttgcagtttacagagccagggccgttgtgaccgtg
gatgcgcaactccaactgaatccttcaatcataaacccagagaataaaagctgccagttg
ctgggatccgagaccttggtgtcatgtttcactgtgagagtttctgcaaatgtgtcaggc
catggtattccaggtacagtagttctgaatgctagccttcagctagacagactgaagcag
aaaggaggaattgagagaacgctattccttaattatcatcgaccacaacacacattccaa
ttagtcattggaaaattggaacgttccaagtaccaggaattcattgtttaccttacagat
gaaaaggagtttcgagataaattaacaccaattagtgttagtttgaattatagtttggat
gattcatactcttcaggggatcttaaaccaataatcaactattacagcgaaacatttctt
cagaaacaggcacacattctgctggattgtggaaaggacaatgtgtgcatcccagccctg
aagctttcagttacccctgatagacaacagctaatatttggagacgaaaacccgctcact
ttaatcgttaacggaaggaatgaaggcgaaggagcatatgaagcagaactcagtgtcata
atcccacccgaagcagattatattggtgttgtacgcaacaatgaggcactgagcacgcta
agctgtgcctataaagtggacaattcaactcaaatggttgtctgtgacctcggaaatccg
atgacagctgggaccaatctgtctgtggggctacgcttttctgttcaacgtttgggggcg
gcacaagccagtatcagctttgacctgcaaatcaaaagttcaaataaagataattcaagc
agcaatcttgtccaactgcaggtcaagatcagtgcagtcgctcgggtaggtgttcggggg
gtgtcacgtcctgagcaaatctttctgcccatcactgactggaagattaaagaaagactt
caaaatgaggagcacattggaccagtagttcagcatgtttatgaactacacaacagtggg
ccgagtgcaatcagtgctgcagtcatggaagtgcattggccgagtaattaccgagatgaa
tatctgctgtacatcttgcagctaaagacaaatggacctttgcactgccacacgaatgct
acaattaatcctctacagttagagactgttgacccgtcagctactggagaacatatcagc
ttgagggagcctccgacgaccacacatcacatcacaagacgagaagtgaggttaccgcag
cctctaaaatatgagcagtcaaaagtactggattgtaacaacataaattgtaccaaaata
gtttgccatgttgatcaactgggaagagggcagagtgcagtgctgaaagttcgggctcgt
ctctgggttcaaaccttcctaaagagaagaaacaaccattactctctacagtctctggtg
tcatttgcagtgaaggaaatggcatacaaaatccagccagaggaactacccagctcaagt
actgtgataaggacgtcagtaatttgggccacgcctgatgcttcactcgcaattcccctg
tgggtcataattctggctgtactggttggtttgctggttctggctattttgatcctggtc
atgtggaagtttggtttctttgatcgagctcgcccacctcaagacgacatgagagatcga
gaacagctccacccaaaaaaggatacagatgcctga

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