Scyliorhinus canicula (smaller spotted catshark): 119966394
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Entry
119966394 CDS
T11175
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119966394 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119966394 (abcb4)
04147 Exosome [BR:
scau04147
]
119966394 (abcb4)
04090 CD molecules [BR:
scau04090
]
119966394 (abcb4)
Enzymes [BR:
scau01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
119966394 (abcb4)
Transporters [BR:
scau02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
119966394 (abcb4)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119966394 (abcb4)
CD molecules [BR:
scau04090
]
Proteins
119966394 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
RsgA_GTPase
Zeta_toxin
Rad17
AAA_28
AAA_16
AAA_5
AAA_30
G-alpha
AAA_7
SbcC_Walker_B
AAA_24
AAA_29
APS_kinase
DUF2207_C
AAA_15
DUF815
MeaB
Motif
Other DBs
NCBI-GeneID:
119966394
NCBI-ProteinID:
XP_038653904
LinkDB
All DBs
Position
5:complement(165226734..165397509)
Genome browser
AA seq
1274 aa
AA seq
DB search
MPNQYTKGTTDEDDKSQHVSTDEKDEKKSKSKKKEKEKKPEMVSLLSLFRYSDCLDKVLM
LFGSLAALIHGTGFPLMIIVFGEMIDSFVQDEMLKNISANITAKIAPDTLEEQMTRFSYY
YVGIGSAVLLAAFIQISFWSLAAGRQTKKIRKAFFHAILRQEIGWFDVTQIGELNTRLTD
DISKINEGIGDKIGLILQSLASFVAGFVVGFLNGWKLALVILAVSPVLGISAAIWSKVLT
SFTEREQNAYAKAGAVAEEALSGFRTVVSFGGQKKEVERYQKNLIDAQKIGIKKAISTNI
SVGFTFLMIYASYALAFWYGSTLIIEENYTVGKMLTVFFSILIGAFAIGQCSPNIEALAT
ARGAAYMVYKIMNQEPIIDSFSENGHKPNQIKGDVEFTNVHFKYPSRPDVEVLKGLQLKL
KSGQTVALVGSSGCGKSTTIQLLQRFYDPENGTILLDGQDIRTLNVRYLREMIGVVSQEP
ILFATTIIENIRYGREDVTMTEIEEAAKEANAYDFIMKLPDKFETLVGERGTQLSGGQKQ
RVAIARALVRNPKILLLDEATSALDAESEATVQAALDKVRKGRTTIIIAHRLSTVQNADI
IAGLQDGVIAEIGTNEELMEAKGIYYALVTAQTFTNEDNEADELINRENEPELETARTTK
VLRRQSTRVSMKKTEMGADKKDTDVKQDLPNISFLHILRMNKTEWPYMLVGTFCSLINGL
LQPAFAVIFSEIIAVFANTEMEHVRRQSTLFSLLFLAIGGISFITFFLQGFTFGKSGEIL
TMRLRYLAFKAMMRQDISWFDDSKNNTGALTTRLATDASQVKGATGVRIGLIAQNVANLG
CACIISFIYGWQLALLILAIVPILAFAGLIQMRMLTGHASKDKEELEKSGKIATEAVENI
RTVVALTRERKFEQMYEENLKLPSRNAKKKAYIYGITFALSQAILYFAYAACFRFGAWLV
THNHLVFRDVMLVFSAIVFGAMALGQTSSFAPDYAKAKISAAHIKMLLEQLPSIDSYSDA
GNVPGSFEGIVKFEDVGFNYPTRPDTTVLRGLTVSVGKGQTLALVGSSGCGKSTTVQLLE
RFYDPLRGKVLLDDHDMKDLNIQWARAQIGIVSQEPVLFDCSIADNIAYGDNSRVVSQEE
IEAAAKAANIHSFIETLPQKYSTCVGDKGAQLSGGQKQRVAIARALVRNPKLLLLDEATS
ALDTESEMVVQEALDKAREGRTCIVIAHRLSTIQNANKIAVFNNGQIAEEGTHQQLIANQ
NLYYSLVTAQMGRN
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaccaatatacaaaaggaaccacagatgaggatgacaaaagtcaacatgtttcc
actgatgaaaaagatgagaaaaagagtaaatcaaagaagaaagagaaggaaaaaaagcct
gaaatggtcagcctactgtctttgtttcgttattcagactgcctagacaaagtgctgatg
ttgtttggcagccttgcagctttaattcatggaactggctttcctctcatgatcatagtg
tttggagagatgatcgacagctttgttcaggatgaaatgttaaaaaacatatcagcaaat
attacagccaaaattgctccagacacattggaggagcagatgacaaggttttcctattat
tatgtcgggataggaagtgctgttctgctcgctgcctttatccagatttccttctggtca
ctagcagcaggaaggcagacaaagaagataagaaaggctttttttcatgcaatactgcgt
caggaaataggatggtttgatgtcactcagattggagagctgaacactcgtctaacagat
gatatctcaaaaataaatgaaggaattggagataagataggcttgatcctgcagtcgctg
gcctcctttgtagctggttttgtggtcggctttttgaatggatggaagctggcattggtc
attctggctgtgagtccggttctgggaatttctgcagccatctggtccaaggtgctgact
tcattcacagaacgagaacaaaatgcgtatgcaaaagctggagcagtagcagaggaggca
ttgtcaggtttcagaactgtggtgtcttttggggggcaaaagaaagaagttgagaggtat
cagaaaaatttaattgacgctcagaagattggaataaaaaaggccattagtaccaatata
tcagtgggattcaccttcttaatgatctacgcatcatatgcactggcattctggtatgga
agtaccctcataattgaagagaactacacagttggaaaaatgctaacagtgtttttttca
attctgattggcgcatttgccattggccagtgttcacctaacatcgaagcattggccact
gcaagaggagcagcatatatggtctacaagatcatgaatcaggaaccaataattgatagt
ttttcagaaaatggacataaacctaatcagattaaaggggatgtggaatttacaaatgtg
cacttcaaatatccttcacggcctgatgttgaggtattaaaaggactgcaactgaagttg
aaaagtgggcaaacagttgctctggttggcagtagtggatgtggaaaaagcaccacaatc
cagctcctacagagattctacgaccctgaaaatggaacgattcttcttgatggacaggat
atccgaactttaaatgttaggtatctcagagaaatgattggggtcgtgagtcaggaaccc
atcctctttgctaccacaataattgaaaacattcgctatggtcgtgaagatgtcaccatg
actgagattgaagaagctgccaaggaagctaatgcctatgatttcattatgaaattgcca
gataaatttgaaacattagtgggtgaaagaggcacgcaacttagcggaggtcagaagcaa
agagttgccattgcacgtgctctggtacgcaatcccaagattctgctgctggatgaagct
acgtctgcattagatgctgagagtgaagctactgttcaagctgctcttgataaggtacgg
aaaggccgcactactataattattgctcaccgtctgtcaacagttcaaaatgcagacatc
attgcaggattgcaggatggtgtcattgcagagataggaaccaatgaagaactgatggag
gcgaagggaatttattatgcgttagtcactgcacagacgtttactaatgaagacaatgag
gcagatgaattgattaatagggaaaatgaacctgaacttgagaccgctagaaccacaaag
gtactgcgaagacagtcaacacgagttagcatgaaaaagacagaaatgggcgcagataaa
aaggatactgatgttaaacaggatcttcccaacatatcctttttgcatattctccggatg
aacaagactgaatggccctatatgcttgtgggaacattctgttctcttataaatggtctc
ttgcagcctgcctttgccgtgatattttcagaaattatagcagtttttgctaatacggaa
atggaacacgttcgtcgtcagagtacacttttttccctgttattcctggcaattggaggc
atctccttcatcacatttttcctccagggtttcacatttggcaaatctggagagatactg
acaatgagattacgatacctggcttttaaggcaatgatgagacaggatattagctggttt
gatgattctaagaacaacactggagcattgacaaccagactggcgactgatgcatctcaa
gttaagggggctactggtgtcagaattggtttgattgcacagaatgtagccaatctagga
tgtgcatgtattatttccttcatctatggctggcagctggcattattgatcttggccatt
gtgccaatcctggcattcgcaggattgatacaaatgagaatgctcactggacatgccagc
aaggacaaggaagaacttgagaaatctggaaagattgcaacagaggcagttgaaaacatt
cgaacagttgttgctctaacaagagaaagaaagtttgaacaaatgtatgaagaaaactta
aaacttcccagcaggaatgcaaaaaagaaggcttacatttatggaatcaccttcgcactt
tcacaagcaattctatactttgcttatgcagcatgttttcggtttggggcatggctggtc
acacataatcatttggttttccgggatgttatgctcgtattctcagcaattgtgtttgga
gctatggctttgggacagaccagctcttttgcacctgactatgcaaaggccaagatatca
gccgctcacatcaagatgctacttgagcaacttccatccatagacagctatagtgacgct
ggtaatgttcccggttcatttgagggaatagtcaagtttgaagatgttggctttaactat
cctactcgccctgatacgactgtgttgcgaggtttgacggtttccgttggaaagggacaa
accttggctctagtgggcagtagtggttgtggcaaaagcaccacagttcagctgctggag
aggttctatgacccactacgtggaaaagtgcttttagatgatcacgatatgaaggacctc
aatattcagtgggctcgggcacagattggaattgtgtcccaagaacctgttttgtttgac
tgcagtattgctgacaacattgcctatggggacaacagtagggtcgtgtcccaggaggag
atagaagctgcagccaaagcagcaaacatacattcctttattgaaacactccctcagaaa
tatagtacatgtgtaggtgacaagggggcccagctgtctgggggtcagaaacaacgtgtt
gccattgcccgagcattagtccgaaacccgaaactcctcctactagatgaagccacttca
gcacttgatacagaaagtgaaatggtcgttcaagaggcgctggacaaagcaagagagggt
cgtacctgcattgtaatagctcatcgcctatctaccatccaaaatgccaacaaaatagca
gtgtttaataatggccagattgcagaggaaggaacacatcaacaacttattgctaaccaa
aacctttactacagtctcgtgactgcacaaatgggacgaaactga
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integrated database retrieval system
