Scyliorhinus canicula (smaller spotted catshark): 119966413
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Entry
119966413 CDS
T11175
Name
(RefSeq) glial fibrillary acidic protein-like isoform X1
KO
K07606
vimentin
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04519
Cadherin signaling
scau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119966413
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119966413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119966413
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
scau04812
]
119966413
04147 Exosome [BR:
scau04147
]
119966413
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
119966413
Cytoskeleton proteins [BR:
scau04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119966413
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119966413
Exosomal proteins of other cancer cells
119966413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
PIBF1
Baculo_PEP_C
DUF1664
DUF885
DUF4407
Motif
Other DBs
NCBI-GeneID:
119966413
NCBI-ProteinID:
XP_038653958
LinkDB
All DBs
Position
5:168479099..168530278
Genome browser
AA seq
446 aa
AA seq
DB search
MASYHRLTLRSKSSSQSALFSPTHRSFTKSISHSSWLNKSAPGKMSANDDPLDFSLLDAV
SDEFKISRTDEKEKLIDLNNRFVSYIEKVRSVEQQNKMLNAELQELKGKGNSKIGSIYEQ
ELKKLRQEVDQISKDKTKIEVERDNLLDDVHTLKAKLRSELQQREEAESNLTDFREDVDE
ATLACADLQRKVDALQDEIIFLKKLHEEEIRNLESQEQNQQAKIELDVARPDLSSALQEA
RSQFDKLASRNISETETWYKSKISDLSQSITRNNEALRLAKQEANDNRREAQTLKCEVEA
LKGAKDFLERQKNEMEDRFSKEAAKFQETVTQFENDIQNLSEQMSYRLSEYQNLLKIKMA
LDAEIATYRKLLESEETRFSTHFSPTPTPLHLQETEFELDNQPEVHSPRRTLRLKTIEMK
DGEVVSEASHQYELQPASELTELTED
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcttcataccatagattgactctacggtcaaaatcaagttctcaatctgcccttttc
tcaccaactcatcgctccttcacaaaatcaatatcccactcaagttggctgaacaagagt
gctcctggaaaaatgtctgctaatgatgacccgttagacttttccctactggacgctgta
agcgacgaattcaaaatcagccgcacagatgagaaagaaaaactgattgacttgaacaat
cgctttgtcagctacatcgagaaggtgaggtctgtggagcaacaaaacaagatgcttaat
gctgaactgcaagaattgaagggcaaaggcaattccaaaattggctccatctacgaacag
gagctgaagaaactgcgccaagaagtggatcagatctctaaggataaaaccaaaattgaa
gttgaacgagacaatttgttggatgatgtccacacactcaaagccaagttgagaagtgaa
ttacaacaacgggaggaagctgaaagcaatttgacagatttcagagaggatgtggacgaa
gcgacactggcatgtgcagatctgcaacgtaaagttgatgcattgcaggatgaaattatc
ttcttaaagaaacttcatgaagaagaaattcgcaacctggagtctcaagaacaaaatcaa
caggccaagattgagctggatgtggctaggcctgacctttcttcagccctgcaagaagct
cgttctcagtttgataaacttgcctccaggaacatttctgaaactgagacttggtacaag
tccaagatttcagacctttctcaatctattactcgcaacaatgaagcccttcgcctggca
aaacaagaagcgaacgataaccgcagagaggcacagacactcaagtgtgaagttgaagca
cttaaaggcgcgaaagactttcttgagcgtcagaagaatgaaatggaggatcggtttagc
aaggaagcagccaaattccaggaaactgtcactcagtttgagaatgacatccaaaatctg
tctgaacagatgagctaccgtttgtctgaatatcagaatctactgaaaattaaaatggct
ttggatgctgagattgcaacatacaggaaattgctggagagtgaggaaaccaggttttcc
acgcatttttctccaacacctacccctttacacctgcaagaaacagaatttgaattggac
aatcaacctgaagttcattcccccagaaggacattgcgcttgaaaacgattgagatgaaa
gatggcgaagtagtcagcgaagcttcacaccaatatgaactgcagccagccagtgaactg
actgaattgactgaagattaa
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