Scyliorhinus canicula (smaller spotted catshark): 119966468
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Entry
119966468 CDS
T11175
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119966468
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
Other domain-containing proteins
Patched domain-containing proteins
119966468
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
DUF1694
Motif
Other DBs
NCBI-GeneID:
119966468
NCBI-ProteinID:
XP_038654127
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All DBs
Position
5:181636905..181657199
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AA seq
878 aa
AA seq
DB search
MAQCQTNCIEKHLRSAFYKLGHSVNKYVWCFFTIPLILSAALGSGFYFLSINEANDIEEQ
FTPINGPAKSERAFIEKHFPTTGSEFSGQRLSTEGSFASLIAVSKGDNILTKIAFQEILS
LDEIVKQLNITYPQDVTVRYDSLCVREADSCFPNKILDFINHSLATRTEISYPMMNGTFI
GLVVGGVTLNQNDITKAKAIKLDYYLQEDNDEMKQRNLLWLKAFLQVFPNELQNQNTIRV
SYFTSLSRQEEFEANSKKIIPLFSITYFLSIFFSITSCMRFDCVRNKVWVATLGVVSAGL
AVLSGFGLLLFCGMKFAINTANAPFLILGIGVDDMFIMLSSWQKTKVKDKVGDRLAQTYA
EAAVSITITTLTDVLAFYIGILTPFRSVQSFCVYTGTTILFCFLYNITFFGAVLALNGRR
EASNRHWLTFRKVEHDPKPDESKCYAMCCVGGASDQESGAESEHPVYFFFKKYYGPILTI
RWTKAFVVLLYAGYLAGSIYGCLNIKEGIDVRNLAFDDSYVVQFYDDQSDFFSKYGPRVM
VSVTEPVEYWNSTIQNEIEICMDRLENNSYVDRTLSESWLRTYVSISKQMQIAITEKNTF
LDNLALLFRIVPLFKQDVEFLKNNQSIIASRFFIQTIYVNNSIAEKQMLIELRKLAQECK
IPLLVYHPAFIYFDQYLVIVTNTIQNVAVAAAAMLVIALLFIPNPICSLWVTFATASVLV
GVTGFMTFWDVNLDSISMINLVICIGFSVDFSAHISYAFVSSEKESANERSIDALYTLGY
PIIQGALSTILGVVVLAAAESYIFRTFFKIMFLVITFGAVHGLIFLPVFLTFFATRRKLN
SVKSDTAATFSKKQIYVNEAFSGKVISNPYGNGRISDE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgtcagacaaattgcatcgagaaacatctccgcagtgctttttataaactt
ggacattccgtgaataaatacgtctggtgtttcttcacaatcccgctgatactttctgca
gctctgggttcaggtttttattttttatcgataaacgaagccaatgacatagaagagcaa
tttacacccattaacggaccagcaaaatctgagagagcgtttattgaaaaacactttcca
accactgggtctgaattctctggacagaggctttccacagaggggtcatttgcttctctg
attgctgtatcgaaaggtgacaacatccttacgaagattgcatttcaagagattttatca
ctagatgaaatcgtgaagcagcttaacattacttatccccaggatgtcacggtcaggtat
gattcgctttgtgtacgggaagcagactcttgctttccaaataaaattttagattttata
aaccacagtttggccaccagaactgagatttcatatccgatgatgaatggaacttttatt
ggtttagttgttggaggcgtaacgctaaatcaaaacgacatcacgaaagcaaaggcgatt
aaacttgattattatttacaagaagataacgatgaaatgaaacagcgcaatttgctgtgg
ctgaaggcatttcttcaagtttttccaaatgaattgcagaatcagaatactatcagggtc
tcttatttcacgtcactgtcaagacaagaggaatttgaagcaaattcaaaaaagattatt
cctttgttctctatcacatattttctttcaatattcttttccatcacatcttgtatgagg
tttgactgtgtgagaaataaggtttgggtcgctactctgggagttgtatcagctggatta
gccgtactgtcgggatttggactacttttgttctgtgggatgaagtttgccatcaataca
gcaaatgcaccttttctgattctcggtattggtgtagatgatatgttcattatgctctcc
agctggcaaaagacaaaggttaaagataaagttggggatcgcctggcacagacgtacgct
gaagcagctgtttccattacaatcaccactctgactgatgttttagctttttatattggc
attctgacaccttttcgatctgtgcagtcattttgtgtttacacaggtacaactattctg
ttctgcttcctttacaatattacgttttttggagctgttctcgcactgaatgggagaagg
gaagccagtaacagacactggctgacattcagaaaggttgaacatgatcctaaaccagac
gaatctaaatgctatgcaatgtgttgtgtaggtggggcttctgatcaggaatcaggtgca
gaatcagagcatccagtttatttcttctttaagaaatattatggtccaatccttacaatc
agatggaccaaggcatttgtggtgctcctgtatgctggttatttggctggcagtatttat
ggctgtttaaacatcaaagaaggtatcgatgttcgaaatcttgcctttgatgattcatat
gtggttcaattctatgacgaccaaagtgattttttctccaagtatgggccacgagtcatg
gtttctgtcactgaacctgtggaatattggaattccaccattcagaatgaaattgaaatt
tgtatggacagattggaaaataattcatatgtagatcgtaccctgtcagagtcctggctt
cgaacgtacgttagtatttccaaacagatgcaaatagctataacggagaaaaatacattc
ttagacaatttagctttactctttcgaattgttcctttatttaaacaagatgttgaattt
ttaaaaaataaccaaagcattattgcttcacgattttttattcagaccatttatgtcaat
aattcaattgcagagaaacagatgctgattgaattaagaaagttggcacaagaatgtaaa
atccctttgctagtttatcatcctgcgttcatctattttgatcaatatcttgttatagta
accaacacaatacagaatgtagccgtggctgctgcagcaatgctggttattgccttattg
ttcatacctaatccaatctgctctctgtgggtaacatttgcgactgcatcagttttagtg
ggcgtgactggtttcatgactttctgggatgtcaatttagattctatatctatgattaat
ctggtcatttgtattggattttctgtggacttctcagctcatatttcatacgcatttgta
tcaagtgagaaagaaagtgccaatgagcgaagtattgatgcattgtacactctcggttat
cctattatccagggagctctttcaacgatactgggtgtggttgtgttggccgctgcagaa
agttacatattcaggacatttttcaaaatcatgtttctcgtcataacttttggggccgtt
catggtctcatatttctgcctgtgtttctgacattctttgcaacccgcagaaagttgaat
agtgtaaaatcagacacggcagcaacattctcaaaaaagcaaatctatgtgaatgaagca
ttcagtggaaaggtgataagcaacccatatggaaatggtagaatttcagatgagtaa
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