Scyliorhinus canicula (smaller spotted catshark): 119966489
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Entry
119966489 CDS
T11175
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119966489 (zeb1b)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
119966489 (zeb1b)
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GFIT
Other DBs
NCBI-GeneID:
119966489
NCBI-ProteinID:
XP_038654187
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Position
5:187756809..187981438
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AA seq
1119 aa
AA seq
DB search
MPHRPRALGKFQEYGETRQPCHVAVSEKDDASVKIMHQPPVTNYNNVVEASSDTDDEDKL
HIVEDESVTDAGECDTNALEDDLPTKRTSLPRKDDTDEEDDGKEENADNLGPDAQTRSDG
CTVNEEGCDSDGETCFHNSTAGDEQSHDPNVQEYLHQGNTAVIFPEAPEEQHRRGTPEAG
GQEENGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQL
DRHMASHKSGRDQRHVVTQTGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCK
KRFSHSGSYSSHISSKKCIGLISLNGRARSGIKTPQGTSPSLSPSTNSPARTQLRHKLEN
NKPLQEQPTVNQIKTEPVDYEYKTMVVTSGINCASSFQNGGFSGNNPLQVTTSPQSVVQA
VVLPTVGLVSPISINLSDIQNVFKVAVLENNHVTLPSKEPGTISSASVQQNSHSLISSIS
LPLIDQDGTTKIIINYSLEPSQLQAVPQNLKKEVPNLADNCTKEKPPEDLTVKTEKTETS
VEGVSNTCLLCNECPGGLNALHELKHYQLKTEAHSGETSIKTSGASASAEENISSDQEPL
KNLLSLLKAYYALNAQPTSEELAKISVAVNLPLEKVKKWFEKMQTGQIPAQPSCPSSPTP
SNEEVKPKLLVSHTDSLPVSESQGNTANSQALDKLTESQTTNTPLNVMADPSRSNTPSPS
PLNLSSASSRNSQSYLNTPESNQEDLQLEPLDLSLPRQQKEGLERPTITSVYHSSVHYVQ
EEPLNLSCIKKEQTENDSITEGNSTSAKPISIAIPTATTQLPTIVAISSQNSVPCLRALA
TIKQASFIPQVAYTYKTINSNGPEPQQKPIQANGNHLHITKAIVFLKEEKQETSSGGVPN
TDDQNDSDSMPPRKKIKKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHQCGICKKA
FKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREGTEQEE
TGPDSLNNSEYTDNRTSPSHLDSDDKDSTAREDESEKEEEEEKESDEMLDNCGEEMREES
EDEVEAEGEVDTTDLMSDVEQENTVNSLKALEVNSTEKN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccgcccccgcgctttggggaaattccaggaatacggtgagactaggcagccc
tgccatgttgctgtcagtgagaaagatgatgcaagcgttaaaataatgcatcagcctcca
gtcaccaactataataatgtggttgaagcaagttcagatacagatgatgaagataaactg
catattgtggaggatgagagtgtgactgatgctggagaatgtgatacaaatgcactggag
gatgatttgccaacaaagcgcacatcgttgccaaggaaagatgacacagatgaagaagat
gatggaaaggaagaaaatgcagacaacctggggcctgatgctcagacacgcagtgatggt
tgcacagtcaatgaagaaggctgtgattccgatggagagacctgcttccataattctact
gcaggagatgagcaaagtcatgatccaaacgtgcaagaataccttcatcaaggaaacact
gctgtcattttccctgaagcaccagaggagcagcatagacgaggcacaccagaagctggt
ggacaagaagaaaacggaactcctgatgcttttgctcagctgcttacctgcccatattgc
gatagaggctacaagcgcttgacttcattgaaagagcacattaaatatcggcatgaaaaa
aatgaagacaacttcagctgctccctttgcagctacacttttgcctacaggacacaactg
gatcgtcatatggcttcacataagtcggggcgcgatcagcgccatgttgtaacgcagacg
ggtgggaaccggaaattcaagtgcactgaatgtggaaaagcatttaaatacaagcatcat
ctgaaggagcacttgcgcatccacagtggagaaaagccatatgaatgccctaactgcaag
aaacggttttcccactcaggctcttacagttcacacatcagtagtaagaagtgtattggt
cttatatcacttaatggtagagcacgttcaggaatcaagacacctcaaggcacttctcca
tccctttcaccatcaaccaatagccctgctagaacacaacttcgtcataagctagagaac
aataagcctttacaagaacaacctaccgtaaaccaaatcaaaacggagcctgtggattat
gagtacaaaactatggtcgtgacctctggtatcaactgtgcgagctctttccaaaatgga
gggtttagtggcaataaccctctccaggttacaacttcacctcagagtgtggttcaggct
gttgtattgccaactgtaggcctcgtctctcctattagcataaatctaagtgacattcag
aatgtttttaaggttgcagtattagaaaataatcatgtcactctcccttccaaagaacca
ggaacaatctcttctgcatcagttcagcaaaacagtcattccctcatatcgtcaatcagt
cttcctttgattgatcaggatggaacaaccaaaatcattatcaactacagtttggagcca
agtcaactccaagctgtgccacaaaatttgaaaaaggaggttcctaacctagcagacaat
tgtacaaaggaaaagccaccagaagacctcacagtcaaaactgagaaaactgaaaccagt
gtagaaggagttagtaacacatgcctgctttgtaatgaatgtcctggtggactaaatgca
cttcatgaactaaagcactatcaactaaaaactgaagctcattcaggagaaaccagtatt
aagacctcgggagcttctgcgtcagcagaagagaacatttcttcagatcaagagccattg
aagaacctgttgtcacttctgaaggcgtattatgcattgaatgcgcaacctacatccgag
gaattggcaaaaatttcagttgctgtaaaccttccattagaaaaagtgaaaaagtggttt
gaaaaaatgcaaactggtcagattccagcccagccatcttgtccctcctctcccacacca
agcaacgaggaggtcaaaccaaaactacttgtcagtcatacagattcattacctgttagt
gagtcacaaggcaacacagcaaattcacaagctcttgataagctaactgaatcgcaaact
actaatacgccacttaatgtgatggcggatccttcaaggagtaatactccctccccatca
ccgctgaatctctcttctgcatcttcgagaaattcacaaagctatctgaacacgcctgaa
agcaaccaagaggatttacaattggaacctcttgatctatcacttccaaggcagcaaaaa
gagggacttgaaaggcccacaataaccagtgtttaccacagcagtgttcattatgttcaa
gaggagcccttaaacttgtcttgtataaagaaagaacaaacagaaaatgacagtattact
gaaggaaattcaacaagtgccaaacctataagtattgcaatccctacagctaccacccaa
ctacccacaattgttgccatttcaagccaaaacagtgttccatgcctccgagccctagct
acaataaagcaggccagcttcattccacaggtggcctatacgtataaaacaatcaattca
aatggaccagagccacaacagaagccaattcaagccaatggaaatcatctacacataaca
aaggcgattgtgttcctgaaggaggagaaacaagagacgagttctggaggagtgcccaat
actgatgatcagaatgattcagattctatgccaccacgcaagaaaattaaaaagacagaa
aatggaatgtatgcctgtgatttgtgtgataaaatatttcagaaaagcagctctcttctt
agacacaagtatgagcatacaggtaaacgacctcatcaatgtggaatttgcaagaaagca
ttcaaacacaaacatcatttgatcgagcacacgcgactgcactctggggagaaaccctat
cagtgcgataaatgtggcaagcgtttctcgcattcaggctcctactctcaacacatgaac
caccgttactcatactgcaaacgagaagctgaagaacgagagggaacagagcaagaggag
actgggcccgattcactgaacaacagtgagtatacggacaacaggacctctccatcccac
ctggattcggatgacaaggacagcactgcaagggaagatgaaagtgaaaaggaggaggag
gaagagaaggagagtgatgaaatgctggataactgtggagaggaaatgagagaggaatca
gaagatgaagtggaagcagaaggagaagtagacaccacagacttgatgagtgatgtggaa
caggaaaatacagtaaatagtctgaaggctttggaagttaactcaacagaaaaaaattaa
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