Scyliorhinus canicula (smaller spotted catshark): 119966607
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Entry
119966607 CDS
T11175
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04217
Necroptosis
scau04622
RIG-I-like receptor signaling pathway
scau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119966607 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119966607 (cyldl)
04625 C-type lectin receptor signaling pathway
119966607 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119966607 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119966607 (cyldl)
Enzymes [BR:
scau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119966607 (cyldl)
Peptidases and inhibitors [BR:
scau01002
]
Cysteine peptidases
Family C67
119966607 (cyldl)
Ubiquitin system [BR:
scau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119966607 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Ub-Mut7C
Motif
Other DBs
NCBI-GeneID:
119966607
NCBI-ProteinID:
XP_038654507
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All DBs
Position
5:complement(222517761..222576807)
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AA seq
804 aa
AA seq
DB search
MFGIDSSKVTMFSSSKKETKYLYFILMEDLPINERVFPAGNIAVIAEAEYMKEIQAEPPT
PGRKLKFHLAEADVHLSLEVGSLNQLSEQNAGLLLAVSPSPVRFSLYLEKDRLENARHIH
HGNLVTVDYKSKFLPGIVRYIGSICDTPKLSGTFLGIELQGEGEVDDQCDGTFGGHQYFS
CKKGCGIFVPFNKVKRRWSVGEGEQCVGAGTINGKDPWVDHPVNPGDRVAVYVEEEMKEG
TVVGIMDGGTTVLVNFESNQMVGEESMMPLKVPLESVIKEDMLQPKGSIQRSNSREISVD
GVGSPGGWKRDLVENGGSRPGSRFLGVKSLVQINLGKGEPMTGVIQWMGHLPDVTDEIAG
VELDEDKGTSDGTWKGHRYFQCAAKRGLFVRVASCQPDTRFQSLAVTLEDLQDPERTTNR
ESCVVPVIVPPPRNEEAFRILEGRMRGIQGHCNSCYMDSALFSLFSCTLVLDSMLYKSTN
HQFGHIQRILREEIVNPLRRHGFVDCKKVMNLRKELTQGGYCAGFTNEEKDPEEFLTVIM
QHVLGLEPLLKLKSPGQKEQECYCHQVFIEKDDDLIVPTVQQLVEHSFHSNHLKLTEVPS
CFIIQMPRFGKNYKMFEKIIPSLELDITDLLCDSPRECCLCGELATQECEECFKDKLFSK
TGLKQYCDMCWHQVHSHSSRRSHRSMKLDCPVEFARTGKAMVPREKMQLFAVLCIETSHY
VSFIKYGPEDRQWMFFDSMSDRHGGESGYNIPTVTHCPEVAKYVNYSAAQLIKEQPRDME
GVAKRQLCDAYMYLYENPRMAVYK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaatcgattcttccaaagtcacaatgttctcctccagtaagaaagagactaaa
tacctttacttcattttaatggaggacttgcccatcaacgagcgtgtctttcctgctggg
aatattgctgttattgccgaggctgaatacatgaaggagatacaggctgagcctccgaca
ccaggccgcaaactgaagttccacctggcggaggcagacgtgcacctttccctggaggtg
ggcagcctgaaccagctgagcgagcagaatgcaggcctgctcctggccgttagcccatct
cccgtacgcttcagcctctacctggagaaggacaggttagaaaatgcacggcacatccat
catgggaacctggtgactgtcgactacaaatccaagttcctgccagggatcgtcaggtac
attggaagcatatgcgacaccccaaagctttccggaacattccttggaatagagttgcag
ggagagggtgaagtcgatgatcaatgcgatggaacgttcggcggacaccagtacttcagc
tgcaagaaaggatgtggcatctttgtgccatttaacaaggtcaaacggcgttggagcgtt
ggagagggggaacagtgcgtgggtgcgggaaccatcaacggcaaggacccatgggtggat
cacccagtgaaccctggagaccgagtggctgtctacgtagaagaggagatgaaggagggg
acagtggtcgggatcatggatgggggcacgacggtgctggtcaactttgaatcgaaccag
atggttggcgaggaatcgatgatgcccttgaaggtgccactggagtcggttataaaggaa
gacatgcttcaaccaaaggggagcatccagcggagtaactcaagggagatctccgtggac
ggagtcgggtcaccgggcggctggaaacgagacctcgtggagaacggagggagtcggcct
gggagtcgcttcctgggagtgaaatctctcgttcaaatcaacttgggcaaaggagaaccc
atgactggagtcatccagtggatgggtcacctcccagatgttacggacgaaattgctggc
gttgaactggatgaagacaaaggaacttcagatggaacctggaaggggcatcggtacttc
caatgtgcagccaaaagaggattgtttgtccgggtagcatcgtgccaacccgacaccagg
ttccagtccctcgctgtaactctggaggatttgcaagacccagaacgaactaccaatcgg
gagagctgtgtggttcctgtcatcgttcctcctccgaggaacgaagaggctttccggatt
ctggagggaaggatgcgcgggatccagggacactgcaattcctgctacatggattccgct
ctcttcagcctcttctcctgcaccttggtgctcgactccatgctttacaaatccacaaac
catcaatttgggcacattcagcggatactgcgggaggagatcgtcaatccactccgcaga
cacgggtttgtggactgtaagaaggtgatgaacctgaggaaggagctgacacaaggcggc
tactgtgcgggatttaccaacgaggagaaagatccggaggagttcctcactgtcatcatg
cagcacgttctgggactggagccattactcaaactgaagtcgccaggtcagaaggagcag
gagtgttactgccaccaggtttttattgagaaggatgatgatcttatcgttcccacagta
cagcagttagtggaacattccttccacagtaatcatctcaaactgactgaggtcccgtct
tgcttcataatccagatgcctcgcttcgggaagaattacaaaatgtttgagaaaatcatc
ccatccttggagctcgacatcactgacctgctgtgcgacagtccgagggaatgctgcctg
tgcggggagctggccactcaggaatgtgaagagtgcttcaaggacaaactcttttcgaaa
acaggactgaaacaatactgtgacatgtgctggcatcaggtacattcccattcctccaga
cggagccacaggtccatgaagctcgattgcccggtcgagtttgcacgcactgggaaggcg
atggtgccacgggagaagatgcagctcttcgccgtgctctgcatcgagaccagtcattac
gtgtcgttcatcaaatacgggcctgaagaccgtcagtggatgttcttcgacagcatgtcc
gacagacacggtggagagagtgggtacaatatccccacggtgacgcactgccccgaagtg
gcgaaatacgtcaactattcagcggcgcagctgatcaaagagcaaccacgcgacatggaa
ggagtggccaagcgacagctgtgtgacgcttacatgtacttgtacgagaaccctcggatg
gccgtgtacaagtga
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