Scyliorhinus canicula (smaller spotted catshark): 119966934
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Entry
119966934 CDS
T11175
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03410
Base excision repair
scau04210
Apoptosis
scau04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119966934 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119966934 (parp1)
04217 Necroptosis
119966934 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scau03032
]
119966934 (parp1)
03036 Chromosome and associated proteins [BR:
scau03036
]
119966934 (parp1)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119966934 (parp1)
Enzymes [BR:
scau01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
119966934 (parp1)
DNA replication proteins [BR:
scau03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119966934 (parp1)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119966934 (parp1)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119966934 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
ProQ
DUF272
Motif
Other DBs
NCBI-GeneID:
119966934
NCBI-ProteinID:
XP_038654820
LinkDB
All DBs
Position
6:16412724..16486554
Genome browser
AA seq
825 aa
AA seq
DB search
MAEGKLFKAEYAKSGRASCKKCTESIAKDSLRLAIMVQSPMFDGKVPHWHHYACFWKRAR
VVSPADVDGLSDLRWEDQEKIKKAIETGGAGGGKGGEQGDGKGEKTLNDFVVEYAKSNRS
VCKGCSKKIEKDTVRISKKMINPEKPQLGMIDHWYHPDCFVASKAELGFLPTYSATQLKG
FNVLSAEDKGELKKQLPAVKSEGMKLLDGIRMSESTLQSMLSLNWSTESSSGHRAPRRML
IAVDFPIEELDKMTKKMEEVKEANVRVVCEDFLDDLQSGKGLQELLSVHGISPWGAEVAP
EVVSEPPVAAKSTAKSSSGKVKREEGSSKSEKKMKLTVKGGGAVDPDSGLEDSAHVFEQG
GKILSATLGLVDISRGSNSYYKLQLLEDDNKRRYWVFRSWGRVGTTIGGNKLEKMSSKEE
AVDHFLGLYEEKTGNAWHCQNFTKYPNRFYPLEIDYGQDEEAVKKLTASSSTKSKLDKAV
QDFIKTIFDVESMKKAMVEFEIDLEKMPLGKLSKRQIQSAYAILSEVQQVVANNGTESQV
LDLSNRFYTLIPHDFGMKKPPLLNSEEYIQAKVQMLDSLLDIEVAYSLLKGGKEDDAKNP
IDVNYEKLHTDIKVLDGQTDEAKIIRDYVKNTHAATHNQYDLEVMEIFKIKREGEEQRFG
PFSELHNRQLLWHGSRITNFAGILSQGLRIAPPEAPVTGYMFGKGVYFADMVSKSANYCH
TSQAEPVGLILLAEVALGNMHELKRANHITKLPKGKHSVKGVGKTAPDPGATIKMDGVDV
PLGKGVQTPVTDSSLLYNEYIVYDVAQVNMKYLLKLNFKYKSSLW
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggggaagctcttcaaagccgagtacgcgaagagcggccgggcctcctgcaag
aaatgcacggagagcatcgccaaggactcgctgcggctggcaattatggtgcagtcgccg
atgtttgacgggaaggtgccccactggcaccactatgcttgtttctggaagcgagcacgg
gtggtgtcgcccgcggatgtggacgggttgtcggaccttcggtgggaagaccaggagaag
atcaaaaaggccattgaaaccggaggggcaggcggaggaaaaggtggcgagcagggagac
ggaaaaggggagaagacgctgaatgactttgtagtagaatacgccaaatcgaacaggagt
gtatgtaaaggctgcagtaaaaaaatagaaaaggataccgtccgtatctccaagaaaatg
atcaaccctgagaagccgcagctggggatgatcgatcactggtaccatcctgactgcttt
gtggctagtaaagcagaacttggctttctgcccacctacagcgctacccaactgaagggc
ttcaatgtcttgagtgcagaagacaagggagaactgaagaagcagcttccagctgtcaag
agcgaaggtatgaagttactggacgggatcaggatgtctgaaagcacgttacaatcgatg
ttgagcctcaactggagtactgagtccagttctggacatcgtgctccaagaaggatgctg
attgctgttgattttcctatagaggagttggacaaaatgaccaagaagatggaagaggtg
aaggaagccaatgtcagggtggtttgtgaggatttcctcgacgatcttcagtcggggaag
gggcttcaggagttgctgtcggtccacgggatctctccctggggagctgaagttgccccc
gaggtggtgtcggaaccccccgttgctgcgaagtccactgcgaaaagctccagtggcaaa
gtcaagcgggaggaaggctccagcaaatcagaaaagaagatgaagctgacggttaaagga
ggaggtgccgttgatcctgactccgggctggaggactcggctcatgtcttcgagcagggc
ggcaaaattctgagcgccacgctggggttggtggatatctctcgtggttcaaattcctac
tacaagctgcagctcctggaagacgacaacaagcggaggtactgggtcttcaggtcatgg
ggccgcgtagggaccaccattggcggcaataaactggagaagatgtcgtccaaagaggaa
gcggtcgaccatttcctgggtctttatgaggaaaagacaggcaacgcctggcattgccag
aacttcactaaataccccaacagattctaccccctggagatcgactatggccaggatgaa
gaagctgtgaagaagttaactgcaagttccagtaccaaatccaagctcgataaggccgtg
caggatttcatcaagaccatcttcgatgtagagagtatgaagaaagccatggtggagttt
gagatcgatcttgagaagatgcccctgggcaaactgagcaagagacagatccagagtgcc
tacgcaatcctcagtgaagttcagcaggttgtcgcgaataatgggacggaatcgcaggta
ctggacctctccaatcgattctacacgctcataccacatgactttggaatgaagaaacca
ccgctcttgaatagtgaagaatatatccaggccaaagtgcagatgctggacagtctgctg
gacattgaggtggcctacagtctcctcaaaggtggcaaggaggatgacgctaagaatcct
atcgatgtcaattatgagaagctgcacacagacatcaaggtcctggacgggcaaactgat
gaagccaagataataagagactatgttaaaaacacacatgctgctacgcacaaccagtac
gatctcgaagtaatggagatattcaagattaagcgtgagggagaagaacaacgtttcgga
cctttcagtgagcttcacaatcgccagctcctctggcacggatctcgcatcaccaacttt
gctggcattctgtcacagggtctccgcatcgcgccaccagaggctcccgtgaccggatac
atgtttggtaaaggcgtctattttgccgacatggtttccaaaagtgcgaattactgccac
acgtcgcaggccgaacccgtggggcttattctgctggctgaagtggccttggggaacatg
cacgagttgaaacgagcaaatcatattacaaaactaccgaaaggcaaacacagtgtgaaa
ggggttggcaagactgctccagatcccggtgctaccatcaagatggacggagtggatgtg
ccactggggaaaggcgtccaaacgccagtcacagactccagtttgctgtacaacgagtac
atcgtgtacgatgtggcgcaggtgaacatgaagtacctgctgaagcttaacttcaagtac
aagagctcgctgtggtga
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